Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152101g00002 ATGTCTCGGAGCATAACGTACATCACCGGATCTCAGCTTCTGGCTCTTAGGCGGCAACCGAACATTGCGATCGTTGATGTGAGGGATGAAGAGAGGACCTACGATGGCCACATCTCTTCCTCTCTCCACTTCCCCAGCGACACTTTCTCCGACAACTTGCCTAACCTTCTCCTCCAGATTAAGGGCAAAGACACCCTCGTCTTCCACTGCGCTCTCAGCCAGGTCCGGGGACCGACCTGTGCTCGAAAGCTTGTCAATTATCTTGAGGAGAGTAAGGAAGATGCTGGGATAAAGAACATCATGGTCTTGGAACGCGGCTTCAACGGTTGGGAAGCTTCTGGTAGGCCTGTTTGTCGCTGCACTAATGTTCCTTGCAAGGAGCATGGGACTGCATAA 396 0.5227 MSRSITYITGSQLLALRRQPNIAIVDVRDEERTYDGHISSSLHFPSDTFSDNLPNLLLQIKGKDTLVFHCALSQVRGPTCARKLVNYLEESKEDAGIKNIMVLERGFNGWEASGRPVCRCTNVPCKEHGTA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152101g00002 131 SMART rhod_4 8 116 IPR001763 -
Stsc152101g00002 131 Gene3D - 1 130 IPR036873 -
Stsc152101g00002 131 ProSiteProfiles Rhodanese domain profile. 18 119 IPR001763 -
Stsc152101g00002 131 FunFam Dual-specificity phosphatase CDC25 1 130 - -
Stsc152101g00002 131 Pfam Rhodanese-like domain 12 112 IPR001763 -
Stsc152101g00002 131 PANTHER M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 5 124 - -
Stsc152101g00002 131 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 3 128 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152101g00002 Stsc-Chr152101 6450 8060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152101g00002 1 75 Sulfurtransferasese or Rhodanese AT5G03455 66.667 4.76e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152101g00002 K18065 - gmx:100305790 226.483