Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc152079g00001 | ATGGCATCTTCAAATTCGCCATGCGCAGCATGCAAATTTCTTCGAAGAAAATGCCAACCAGAGTGCGCTTTTGCACCATACTTTCCACCGGATCAGCCTCAGAAGTTCGCGAATGTTCATAGAATCTTTGGTGCAAGCAATGTCACAAAGCTTCTCAACGATTTACACCCTCACCAGCGCGAAGACGCCGTCAATTCCCTCGCCTACGAGGCGGAGATGCGCCTCCGCGACCCCGTATACGGTTGCGTGGGCGTTATCTCTCTCCTCCAGCACCAGCTCCGGCAGCTCCAGATGGACCTTTACTGCGCTAAATCAGAGCTATCTCGGTACCAAAGTTTGAGTGTTAACGCCCACCACCACGCTCTTATTGGTGGTGAATCTGCTGTCGTGGGATACCAGCACCAGAATCAAAATAATAATAACTCTGCTGGTGCTGGAACCCGCGACAGCAGTAATCACTACCAACAAAGTAGTAATCACCACCACCACCAATTCTTTCCGCAGCAGCAGATAGTAAGAAGTTTTGATGGAGGGAACAATTATGACGCGAGTCTCTTGGCTATGAACATCTCCGCTAGCTTAGGGCAGCTCAATCAGATTCAGCAGCATAGCGCGGCCGGTGGCGGTGATGACCGCCGCACCGTCAACAACCCTTCCTAA | 660 | 0.5121 | MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQSLSVNAHHHALIGGESAVVGYQHQNQNNNNSAGAGTRDSSNHYQQSSNHHHHQFFPQQQIVRSFDGGNNYDASLLAMNISASLGQLNQIQQHSAAGGGDDRRTVNNPS | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc152079g00001 | 219 | ProSiteProfiles | LOB domain profile. | 6 | 107 | IPR004883 | - | |
Stsc152079g00001 | 219 | MobiDBLite | consensus disorder prediction | 135 | 163 | - | - | |
Stsc152079g00001 | 219 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 4 | 157 | - | - | |
Stsc152079g00001 | 219 | Pfam | Lateral organ boundaries (LOB) domain | 7 | 103 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc152079g00001 | Stsc-Chr152079 | 5307 | 5966 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc152079g00001 | 2 | 216 | AS2 family | AT1G65620 | 63.134 | 1.05e-81 | 240 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Stsc152079g00001 | LOB | 3.1e-42 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc152079g00001 | - | - | gmx:100819502 | 330.872 |