Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152072g00005 ATGAATTTTTCACGTAATATTATTCATTTCTTGCAGGGCCCACCACTTGCTGGAAAGTATGATATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAACTTGAAGGCCTTATCAATGATGCTTTAGACAAAGGAGCTGAGATTGTTGCTCGTGGAAGTTTTGGACATATAGGTGAAGATGCTGTTGATCAATATTTTCCCCCTACTGTGATTGTGAATGTGAACCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGACGAGGAGGTTGTCAAGCTTGCAAATGACTCAAAATATGGGCTTGGCTGCGCTGTTTTCTCAGGTTCTCAGGACCGTGCCAGAGATATAGCTTCACAAATACATTGTGGGGTTGCTGCCGTTAATGACTTTGCATCAACGTACATGTGTCAGTCCCTGCCCTTTGGGGGCGTGAAGCATAGTGGATTTGGACGATTCGGTGGTGTAGAAGGTCTGCGAGCCTGCTGTCTTGTCAAGGCAGTTGTGGAAGATAGATGGTGGCCATTTGTTAAAACCAAGATACCTAAACCTATTCAGTATCCTGTTGCAGAGAATGGATTCGAATTTCAGGAATCACTTGTGGAAGCACTTTATGGACTCAACATATGGGAACGTTTGCAAGCATTAGTAAACATTTTGAAGATGCTTACTGAGCAGAACCCTGCCGGTGAAAGCACTAAGAAGAAAAATGAATGA 747 0.427 MNFSRNIIHFLQGPPLAGKYDMGALCMHEHSEKLEGLINDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVKLANDSKYGLGCAVFSGSQDRARDIASQIHCGVAAVNDFASTYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFVKTKIPKPIQYPVAENGFEFQESLVEALYGLNIWERLQALVNILKMLTEQNPAGESTKKKNE 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152072g00005 248 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 12 149 IPR016163 GO:0016620
Stsc152072g00005 248 Pfam Aldehyde dehydrogenase family 12 178 IPR015590 GO:0016491
Stsc152072g00005 248 SUPERFAMILY ALDH-like 10 180 IPR016161 GO:0016491
Stsc152072g00005 248 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 150 178 IPR016162 GO:0016491
Stsc152072g00005 248 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 12 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152072g00005 Stsc-Chr152072 10767 13637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152072g00005 13 247 Aldehyde Dehydrogenase Gene Family AT3G66658 75.745 3.39e-140 404