Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc152072g00004 | ATGGCGTTTTGGTGGCCATTGCTTGTCTTAGCATTCGCTTACGGACTCTGCAGGTTTCTTTTCATGCTTATTCCTCCAAAGGTTCCTTCCATCGATGTTGAAACTTCCGACGTGTTGGATGATGGAAACCAAGCGCAGGAGAATAGCTTCATATATGTTCCTCCGAGAGGAACGTCGCAGCAATCTGGAAAGATAGTTCAGTGCTATGAGCCTGCAACTATGAAATATTTGGGATATGTTCCGGCATTGACGCGTGATGAGGTTAAGGATCGCGTGGCAAAAGTAAGAAAGGCTCAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGACGCACGTTTTTGCGTATACTTTTGAATTATATAATCAAGCATCAAGCACTCATATGCGAAATATCTTCGCGTGATACTGGAAAGACCATGATAGATGCCTCTTTAGGAGAAATAATGACAACTTGTGAGAAGATCAATTGGCTACTGTCAGAGGGCGAACAGTGGCTAAAGCCTGAATACCGGTCTTCTGGAAGAGCAATGCTTCACAAGAGAGCAAAAGTAGAATTCCACCCCCTTGGTGTTATTGGTGCCATCGTTTCATGGAATTATCCTTTCCNNNNNNNNNNTTCTGGAAATGGCATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATCCAATCTGCCCTTGCTGCAATAGGAGCTCCAGAGGACCTTGTTGAGGTCATAACAGGATTTGCTGAAACTGGAGAAGCTTTGGTATCTTCTGTTGATAAAGTCATATTTGTTGGATCGCCTGGTGTGGGGAAGATGATAATGAGAAATGCTGCTGAGACACTTATACCAGTTACGCTAGAGCTTGGTGGAAAAGATGTATTTGTTGTTTGTGATGATGTAGACGTGGACAATGTTGCGCAAATTGCTGTCAGGGCTGTTCTTCAATCAAGTGGACAGAACTGTGCTGGGGCTGAGAGATTTTATGTCCACAGAGACATTTACTCTTCTTTTGTCAGTAAAGTTACCAAAATCATAAAATCAATTAGAGCTGGCCCACCACTTGCTGGAAAGTATGATATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAACTTGAAGGCCTTATCAATGATGCTTTAGACAAAGGAGCTGAGATTGTTGCTCGTGGAAGTTTTGGACATATAGGTGAAGATGCTGTTGATCAATATTTTCCCCCTACTGTGATTGTGAATGTGAACCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGACGAGGAGGTTGTCAAGCTTGCAAATGACTCAAAATATGGGCTTGGCTGCGCTGTTTTCTCAGGTTCTCAGGACCGTGCCAGAGATATAGCTTCACAAATACATTGTGGGGTTGCTGCCGTTAATGACTTTGCATCAACGTACATGTGTCAGTCCCTGCCCTTTGGGGGCGTGAAGCATAGTGGATTTGGACGATTCGGTGGTGTAGAAGGTCTGCGAGCCTGCTGTCTTGTCAAGGCAGTTGTGGAAGATAGATGGTGGCCATTTGTTAAAACCAAGATACCTAAACCTATTCAGTATCCTGTTGCAGAGAATGGATTCGAATTTCAGGAATCACTTGTGGAAGCACTTTATGGACTCAACATATGGGAACGTTTGCAAGCATTAGTAAACATTTTGAAGATGCTTACTGAGCAGAACCCTGCCGGTGAAAGCACTAAGAAGAAAAATGAATGA | 1770 | 0.4288 | MAFWWPLLVLAFAYGLCRFLFMLIPPKVPSIDVETSDVLDDGNQAQENSFIYVPPRGTSQQSGKIVQCYEPATMKYLGYVPALTRDEVKDRVAKVRKAQKMWAKTSFKQRRTFLRILLNYIIKHQALICEISSRDTGKTMIDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRAMLHKRAKVEFHPLGVIGAIVSWNYPFXXXXSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMRNAAETLIPVTLELGGKDVFVVCDDVDVDNVAQIAVRAVLQSSGQNCAGAERFYVHRDIYSSFVSKVTKIIKSIRAGPPLAGKYDMGALCMHEHSEKLEGLINDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVKLANDSKYGLGCAVFSGSQDRARDIASQIHCGVAAVNDFASTYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFVKTKIPKPIQYPVAENGFEFQESLVEALYGLNIWERLQALVNILKMLTEQNPAGESTKKKNE | 589 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc152072g00004 | 589 | Pfam | Aldehyde dehydrogenase family | 60 | 519 | IPR015590 | GO:0016491 | |
Stsc152072g00004 | 589 | SUPERFAMILY | ALDH-like | 60 | 521 | IPR016161 | GO:0016491 | |
Stsc152072g00004 | 589 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 66 | 517 | IPR016162 | GO:0016491 | |
Stsc152072g00004 | 589 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 317 | 328 | IPR016160 | GO:0016491 | |
Stsc152072g00004 | 589 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 289 | 296 | IPR029510 | GO:0016491 | |
Stsc152072g00004 | 589 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 59 | 519 | - | - | |
Stsc152072g00004 | 589 | FunFam | aldehyde dehydrogenase 22A1 | 65 | 311 | - | - | |
Stsc152072g00004 | 589 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 297 | 492 | IPR016163 | GO:0016620 | |
Stsc152072g00004 | 589 | FunFam | Aldehyde dehydrogenase 22A1 | 297 | 492 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc152072g00004 | Stsc-Chr152072 | 7828 | 13789 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc152072g00004 | 1 | 588 | Aldehyde Dehydrogenase Gene Family | AT3G66658 | 76.174 | 0.0 | 988 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc152072g00004 | - | - | gmx:100802990 | 1102.04 |