Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152055g00003 ATGGAAGCTTCGAGTTCAGATGCATCAGTGGATTTGAATTCGGATAATTCATGTGAATCAAACAACATAGAAGAGTTTTTATGTGATGTTGATGAGCAGTATGTGCCAAAGGTTGGCATGCTTTTTCAATCACTTGAGGAAACTAGGAATTTCTATTGGGATTATGCTAAACATGCAGGGTTTGCTATAAAAATAAGGAACACAAATAAGAGTAAGAAATCAAATGAGATATTGAACCAACTGCTTTCATGTAATAGAAAAGGGAAAAGAAGGTCGGATGTGACAGTTGCTGAGAAGACGAATGCAGTATACGCTGCTAATTGTTCAGCGAGAGTTTATGTGCATCATTTGAGGATAATTGGAATCTGGGAGATTTCCAAAGTGGTTTTGGGATATTCACATCCATGCTGTCCAAATCATGCAGCAATGTTTCCTCAATACCGATAG 447 0.3758 MEASSSDASVDLNSDNSCESNNIEEFLCDVDEQYVPKVGMLFQSLEETRNFYWDYAKHAGFAIKIRNTNKSKKSNEILNQLLSCNRKGKRRSDVTVAEKTNAVYAANCSARVYVHHLRIIGIWEISKVVLGYSHPCCPNHAAMFPQYR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152055g00003 148 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 143 - -
Stsc152055g00003 148 Pfam FAR1 DNA-binding domain 50 137 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152055g00003 Stsc-Chr152055 16512 17299 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc152055g00003 FAR1 5.3e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152055g00003 - - adu:110280446 149.058