Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152049g00001 ATGACTTCTTCTTCTTCATCCTATTATTCAAGAAGCTTCTCAGCGAACTCGCGGGACTACAAGCTTCTAGAAGAAGTCGGATTCGGCGCGAGCGCAACCGTCTACCACGCCGTCCACATCCCCTCAAACGAGCAAGTCGCGGTGAAGGTGCTGGATCTGGACCGATGCAACAGCAACTTCGACGAGATACGGCGAGAGGCTCAGACCATGAGCCTCATCGACCACCCGAACGTCGTCCGCGCCTTCTGCTCCTTCGTGGTCGACCGGAGTCTGTGGGTGGTTATGCCTTTTATGGACCAAGGCTCATGCCTCCACCTCATGAAGGTCGCATACCCCGACGGCTTCGAAGAAGATGCCATTGGATCCGTACTCAAGGAGACACTCAAGGCGCTTGACTACCTCCACCGCCATGGCCACATCCACCGCGATGTTAAGGCTGGGAATATACTTTTGGATTCCAATGGCGATATCAAGCTTGCCGATTTCGGTGTTTCTGCTTGCATGTTTGATGCCGGCGATAGGCAGCGCTCCAGGAACACTTTTGTTGGAACTCCTTGCTGGATGGCACCGGAGGTGCTGCAGCCTGGAACTGGTTATAATTTCAAGGCTGATATTTGGTCTTTTGGGATCACGGCACTTGAGCTGGCTCATGGTCATGCACCTTTCTCGAAATATCCTCCGATGAAGGTGCTGCTAATGACCATACAGAATGCCCCTCCAGGCCTTGATTATGATCGGGATAGGAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCTTGGTAAAAGATCCAACAAAGAGACCAACTGTGGAGAAGTTACTGAAACATTCTTTCTTCAAGCAAGCCAAGCCTCCTGAGCTTTCTGTAAAGAAATTGTTTGCTGACTTACCTCCGCTTTGGAATCGCGTAAAAGCTCTGCAGCTTAAAGATGCTGCTCAACTAGCGCTAAAGAGAATGCCTTCTGCAGAGCAAGAAGCAATATCTCAGAGTGAATATAAGCGAGGAGTTAGTGCATGGAACTTTGATCTTGATGATTTGAAAGCTCAAGCTTCATCGGTAGAGGACAATGATGATTTTGCCGAGATGAAGGAAGAAGATGAAAACAAAATTGTTAGCGAGTACAAGGACACAACTGATTCTCAGCTTAGTGTGGATAACACGAATTTAGAGAACTCACAACATGAGATTGGACTAGAAGTAGGTGGTAGTCACACATCACAAAATGAGAAGAGAAATGGATTGCTTGCTGAGGCATCACCATCTACCCAAGATAAGGATACAGGAATGAGCAAGACTAAAACTCAATCAACAAGAATTCGTAAAACCCAGAGTGGGCCACTGGTGCCGGGCATGGTTCTTGGTCATTCCTTACCTGATAGAGGGTCTACATTTGAAAGGTTGGAGAGTGAAAATCAGTCATCAGGTGACAAAAGTAGTCGTGATTCACGACGAGCTCCCAACTTTAGTGGTCCATTGATGCTTCCAAACAGAGCTTCAGCAAATAGTTTATCTGCTCCAATAAAATCTTCTGGAGGATACAGAGATTCTTTGGATGACAAATCTAAGACTAATCTAGTGCAAATCAAAGGACGATTCTCAGTGACTTCAGAGAATTTAGATCTGGTCAAGGATATCCCCGTCAGTTCAGTTTCACGCAGATCTTCGCAGGGATCACCACTGAGGAAATCTGCCAGTGTTGGTGATTGGATGTCGGATTCCAAACAAATGCCAATTGGTCAATCGTCGAAAGATTCTGCGAACATCAATGTTTCCGCCTCACCTCTTATACCTCATCTTCAAAACCTTTTCCATCACACATCTATTCAGCAGGATCTCATAATGAATCTTTTGAATAGCTTGCAACCTGCTGAGGCAGTTGATGCTTCTCAGAATGGAAAGTTGCCACCGCTACCTCGCACTCCAGAGAACAATGGAACTATTGAAACAACAGCCTCAGAGAGGGAGCAACTGCTAGTGCTAAAAATTTCGGAACTTCAAGCACAGATGATGAATTTGACTGACGAATTGAATTCTGAAAGGTTAAAATACCAGCAGTTGCAACAACAGTTAAATGCTCTTTACAGCCAAGAACAAAATGGAAAAAGAGAATGA 2118 0.457 MTSSSSSYYSRSFSANSRDYKLLEEVGFGASATVYHAVHIPSNEQVAVKVLDLDRCNSNFDEIRREAQTMSLIDHPNVVRAFCSFVVDRSLWVVMPFMDQGSCLHLMKVAYPDGFEEDAIGSVLKETLKALDYLHRHGHIHRDVKAGNILLDSNGDIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDPTKRPTVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKRMPSAEQEAISQSEYKRGVSAWNFDLDDLKAQASSVEDNDDFAEMKEEDENKIVSEYKDTTDSQLSVDNTNLENSQHEIGLEVGGSHTSQNEKRNGLLAEASPSTQDKDTGMSKTKTQSTRIRKTQSGPLVPGMVLGHSLPDRGSTFERLESENQSSGDKSSRDSRRAPNFSGPLMLPNRASANSLSAPIKSSGGYRDSLDDKSKTNLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPLRKSASVGDWMSDSKQMPIGQSSKDSANINVSASPLIPHLQNLFHHTSIQQDLIMNLLNSLQPAEAVDASQNGKLPPLPRTPENNGTIETTASEREQLLVLKISELQAQMMNLTDELNSERLKYQQLQQQLNALYSQEQNGKRE 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152049g00001 705 Pfam Protein kinase domain 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc152049g00001 705 ProSiteProfiles Protein kinase domain profile. 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc152049g00001 705 MobiDBLite consensus disorder prediction 496 511 - -
Stsc152049g00001 705 FunFam Serine/threonine-protein kinase BLUS1 9 97 - -
Stsc152049g00001 705 CDD STKc_OSR1_SPAK 19 281 - -
Stsc152049g00001 705 Coils Coil 657 705 - -
Stsc152049g00001 705 MobiDBLite consensus disorder prediction 629 648 - -
Stsc152049g00001 705 MobiDBLite consensus disorder prediction 416 445 - -
Stsc152049g00001 705 MobiDBLite consensus disorder prediction 416 520 - -
Stsc152049g00001 705 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 101 331 - -
Stsc152049g00001 705 MobiDBLite consensus disorder prediction 552 587 - -
Stsc152049g00001 705 SUPERFAMILY Protein kinase-like (PK-like) 18 332 IPR011009 -
Stsc152049g00001 705 MobiDBLite consensus disorder prediction 463 485 - -
Stsc152049g00001 705 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Stsc152049g00001 705 Gene3D Transferase(Phosphotransferase) domain 1 101 330 - -
Stsc152049g00001 705 Gene3D Phosphorylase Kinase; domain 1 9 97 - -
Stsc152049g00001 705 SMART serkin_6 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc152049g00001 705 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 12 681 IPR047173 GO:0043539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152049g00001 Stsc-Chr152049 10430 18626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152049g00001 13 700 MAP Kinase Kinase Kinase Kinase AT4G10730 65.808 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Stsc152049g00001 Pkinase 6.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152049g00001 - - gmx:100783699 1125.15