Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152042g00001 ATGCAAATGGAAACTCTCCCACTCCTCCTCACCCTAGCAGCAGCATTATCAGCTTACTTCCTTTGGTTCAAACTCCTTTCCCAAACCTTAACCGGCCCCAAGGCATGGCCATTCGTAGGGAGCCTCCCGCTCCTCTTCAAGAACCGCCACCGCGTCCACGACTGGATAGCCGACAAACTCCGCGCCACCGCCGGAGCCACCTACCAAACATGTATCATACCATTTCCTTTCTTGGCACGCAAGCAAGGGTTCTACACCGTCACATGCCACCCAAAAAACCTCGAGCACATCCTCCGAACCCGGTTCGACAACTACCCTAAGGGCCCTAAATGGCAAACAGCATTCCACGACCTCTTAGGGCAAGGCATTTTCAACAGCGACGGTGACACGTGGCTCATGCAGCGGAAAACAGCTGCCTTAGAGTTCACTACACGAACTCTAAGGCAAGCAATGGCGCGGTGGGTGAACCGCACCATCAAGAATCGTCTATGGTGCATCCTAGACAAAGCAGCGAAGGAGAAGGTCCAAGTAGACCTCCAGGACCTTCTCCTTCGCCTGACATTCGATAACATTTGCGGTCTCACTTTCGGGAAGGACCCCGAAACTCTATCACCACATTTACCAGAAAACCCTTTCGCCGTGGCGTTCGATACTGCAACTGAAGCAACAATGCACAGATTCTTGTACCCAGGCATCGTTTGGAGGTTCCAGAAGCTTCTATGCATCGGACAAGAAAAACGGTTAAAGGAGAGTCTTGAGGTAGTTGAAACTTACATGAACGACGCCGTTTTGGACCGCAAGGAAGCCCCCTCTGACGACTTGCTCTCCCGTTTCATGAAGAAGCGTGACGTTAACGGAAAATCGTTAAGTCCAACGGTTTTGCAACGGATCGTTCTGAATTTCGTTTTGGCGGGAAGGGACACTTCATCGGTGGCGCTCAGCTGGTTCTTCTGGCTCGTAATGAATCATCCCAATGTGGAGGCGAGGATTTTGTCAGAGATCGCTGCGGTTCTCAGCCAGAGCCGCGGCGGAGACCGAAGGCGGTGGGTGGAGGAGCCGCTGGACTTCGACGAGGCGGACAAGATGGTTTACCTGAAGGCGGCGCTAGCGGAGACGCTGCGGTTGTACCCGTCGGTGCCTCAGGATTTCAAGCAGGCCGTCGCCGACGATGTGTTGCCAGACGGCACGGTGGTTCCGGCTGGTTCGACGGTGACGTATTCGATATACTCCGCGGGGAGGGTTGAGAGTGTTTGGGGAAATGATTGCTTGGAGTTTAGACCGGAGCGATGGCTTTCGGTTCGTGGAGACCGGTTCGAACCGCCAAAGGATGGGTTCAAGTTCGTGGCTTTTAATGCTGGACCGAGAACTTGTTTGGGGAAGGACCTGGCTTATCTTCAGATGAAATCGGTGGCTGCGGCTGTGCTTTTGAGGTACCGGCTGTTGCCAGTTCCCGGTCACCGTGTGGAGCAGAAGATGTCACTCACTCTGTTCATGAAGAATGGGCTCATGGTGTTCCTGGAACCAAGGAAGATTGAGGGTGTGATGACAGAGGTTGGTGCCACGTAA 1566 0.537 MQMETLPLLLTLAAALSAYFLWFKLLSQTLTGPKAWPFVGSLPLLFKNRHRVHDWIADKLRATAGATYQTCIIPFPFLARKQGFYTVTCHPKNLEHILRTRFDNYPKGPKWQTAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAAKEKVQVDLQDLLLRLTFDNICGLTFGKDPETLSPHLPENPFAVAFDTATEATMHRFLYPGIVWRFQKLLCIGQEKRLKESLEVVETYMNDAVLDRKEAPSDDLLSRFMKKRDVNGKSLSPTVLQRIVLNFVLAGRDTSSVALSWFFWLVMNHPNVEARILSEIAAVLSQSRGGDRRRWVEEPLDFDEADKMVYLKAALAETLRLYPSVPQDFKQAVADDVLPDGTVVPAGSTVTYSIYSAGRVESVWGNDCLEFRPERWLSVRGDRFEPPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRLLPVPGHRVEQKMSLTLFMKNGLMVFLEPRKIEGVMTEVGAT 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152042g00001 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Stsc152042g00001 521 CDD CYP86A 69 502 - -
Stsc152042g00001 521 Gene3D Cytochrome P450 26 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152042g00001 521 FunFam Cytochrome P450 24 512 - -
Stsc152042g00001 521 SUPERFAMILY Cytochrome P450 23 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152042g00001 521 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152042g00001 521 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152042g00001 521 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152042g00001 521 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152042g00001 521 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152042g00001 521 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152042g00001 521 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152042g00001 521 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152042g00001 521 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152042g00001 521 PANTHER CYTOCHROME P450 25 503 - -
Stsc152042g00001 521 Pfam Cytochrome P450 32 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152042g00001 Stsc-Chr152042 5089 6955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152042g00001 3 509 Cytochrome P450 AT5G58860 76.228 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152042g00001 K15401 - gmx:100788343 904.82