Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152015g00003 ATGTCGAACGAAACATTTCGAGTGTTGAAGGTTCGCGACAATGAAATGAAAATTAAATCAGCCATTCACAAAAAAGTTAAGCTCCTTCTCCGCAGCAACCCTCTGTTCAAGGGGAAATCTAGCATAGTTATTGAAGATCGTCAAGAAAAACCTAGCCCACGTCACAAATCACGGCCAGGGGAGGTTAAGGTGGTGAGCAGTCTCAAGCAGTCAGCAACCTACAAACGTGCTTCCCTTATCAATGATGCAATATTTATCTCATTCGGAAGAAAACGTAGAATGGTTAGACGGGGCCCTGAATCCTCAGCCGAAGCTTCACTTGCTTTGAGGAGAAACGATCGTAGCCATCATGTTAATCATACCCAGGTTTATGATTCAAAATGGATTGGGGCTGATCAAGTGGCACAAGCATCTATGGCACCGCTGATGCAAAACATAACATATGTACCTGATGCCGAGGTCCCTGTCAAATTCCATGACTTCTTTGCTGAAGAAGCAAATGCTAAGACCATATATGTCCCAAGGAAGCGAAGCATGGGAATTGATTTAAATAGGCCGGCATTTCCTGCTATATTTTCGTCGGGGGCCTTTCCTTCAAAGTGTGACCATGTCAAGGTTATTTCAAAGACCGGTGCAGAGTATAATATGGTGCTTAACTGGCAATATGAAAACATGATTTGTGGTGCGATTTTAACTGGGGGATGGAGTGAATTTGTTCAACGCAATCATATAAGGGTTGGCGATGTTGTCACGTTCTCTGTATCATCCTTGGACGAACAAGTTATCGAAATTGCTTCAAAAAGGGGTTCATCGAGCTAG 819 0.4335 MSNETFRVLKVRDNEMKIKSAIHKKVKLLLRSNPLFKGKSSIVIEDRQEKPSPRHKSRPGEVKVVSSLKQSATYKRASLINDAIFISFGRKRRMVRRGPESSAEASLALRRNDRSHHVNHTQVYDSKWIGADQVAQASMAPLMQNITYVPDAEVPVKFHDFFAEEANAKTIYVPRKRSMGIDLNRPAFPAIFSSGAFPSKCDHVKVISKTGAEYNMVLNWQYENMICGAILTGGWSEFVQRNHIRVGDVVTFSVSSLDEQVIEIASKRGSSS 272
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc152015g00003 272 ProSiteProfiles B3 DNA-binding domain profile. 171 268 IPR003340 GO:0003677
Stsc152015g00003 272 MobiDBLite consensus disorder prediction 45 64 - -
Stsc152015g00003 272 SUPERFAMILY DNA-binding pseudobarrel domain 190 259 IPR015300 -
Stsc152015g00003 272 Pfam B3 DNA binding domain 188 261 IPR003340 GO:0003677
Stsc152015g00003 272 CDD B3_DNA 198 252 IPR003340 GO:0003677
Stsc152015g00003 272 Gene3D - 171 272 IPR015300 -
Stsc152015g00003 272 MobiDBLite consensus disorder prediction 45 62 - -
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Stsc152015g00003 B3 4.1e-09 CL0405
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152015g00003 - K09287 atri:130821438 40.4318