Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151992g00001 ATGGCTGCAGCATTAGAGTGCTGGTCCAGCCGCGCTACCACCACCACCGACGACGACATGGTCGAGCAGGTCCTCATGCGCTCCCACCATAGATCCGAAGCCCTCACCGCACTCGATCCCCCCTCCTCCTCTTCCTCCTCCTCCTCCACCACCTCCACCACCACCTCCTCCACCAAAGACTCCAACAATTCCATCGTCCATAAGAAGCTTCAGAAGCTCTCTCGAAACGTTTCGGAAGCCATTGCGTCACTCAAGAACACACTCAACATTCAAGACTCCAATGGCACAAGGGACCCACTTTCTTCTTCTTCTTCTTCGTCTTCGAATTCTTCGAAGATCGAAGGGTCACGGAAAGTTGTGTGGGGCTGCGTTGTTCGAAACCTGACTCAGCTTTACCCTGGAAGCCAGTTACCGGAGAAGCTCATGTCCAACATTCGGAAGCACTACGATTCGTTGCCACTCAGCTATGCACAGGCTGATTTTGATATGAAGGATGTGTTTCTTCACATCAAGCTAATGGAACAAGCATCAGCCAATGACTACCCTGCCATCCTGATTCAAGAGGAGAGTGATGATGGTGGTGGTTGTGATGTTGTTAAAGGGTTTGTGTTGAAGCTCACTTTTGCTTGCAACTCTCCGATCTCATGGCCTGCAATGTCTAGTGCATTGGACAGTTCATCCATTTCCTGCAAGAAAGTTCAGATCTTTGAGAAGAAAGGTTTCACAATTGGGATTGTTCTCCTTGTTGTTCATCAAGGGCAAGAGAAGCTTGTGAGGACCCGGGTCGAAAATGCTCTTAGATTTGCAATGAAGAAGTCAAAAACCAGTTCTGTGAAGCTACCGTTTGGGCTCTGTGGGTGCCAGGAAGAGATCTCAAAAGGGAGATCAGAGCTTGGAGAAATTGAAGAAGATGGTAGTGGTGATGCATCATCATGCTATATGATGAGGGATTTTGAGAATTCAAGCCAAAAGATTCAGCTTCAGGTTCCATTGCCTAGTTCATCTTTTGTTGTGTCAGTGGATGAATGGCAGACAATAAAATCGGGCTGTAATGAGATCGAGAAATGGGTGTTGAATTCAGATAATGTTGAGTTTTTGGAGCAGATTGGACCAAATTCCTATAAGGGTTTCTACAATGGGAAAAGGGTTGGCATTGAAAAACTCAAGGGGTGTGACAAAGGGAATGCTTATGAATTCGAGCTCCGAAAAGATCTTCTTGAACTCATGACTTGTGGCCACAGAAACATTCTTCAGTTTGTTGGTATCTGTGTGGATGATAATCATGGCTTGTGTGTAGTTACCAAGTTCATGGAAGGTGGTTCTGTTCATGACTTTTTGTTGAAGAACAAGAAGATTCATGCAAAGGATATTATAATTGCCGGGGATCCTGAGAGTGTGACCGAGACATGGATGAGCAATGTTTATAGTTTCGGCATGGTAATTTGGGAGATGGTAACTGGTGAAGCAGCATATTCGGCATTATCACCTGTTCAAGCAGCAGTTGGGATTGCTGCTTGTGGCCTTAGACCTGAAATCCCAAAAGACTGTCCACAAACCCTGAAATCAATCATGACAAAGTGCTGGAACAATACTCCTTCGAAACGCCCTCAATTCTCTGAGATCTTAGTATTGTTGCTGCGTCCAAATAGCATCAATAGGTAA 1662 0.4561 MAAALECWSSRATTTTDDDMVEQVLMRSHHRSEALTALDPPSSSSSSSSTTSTTTSSTKDSNNSIVHKKLQKLSRNVSEAIASLKNTLNIQDSNGTRDPLSSSSSSSSNSSKIEGSRKVVWGCVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQADFDMKDVFLHIKLMEQASANDYPAILIQEESDDGGGCDVVKGFVLKLTFACNSPISWPAMSSALDSSSISCKKVQIFEKKGFTIGIVLLVVHQGQEKLVRTRVENALRFAMKKSKTSSVKLPFGLCGCQEEISKGRSELGEIEEDGSGDASSCYMMRDFENSSQKIQLQVPLPSSSFVVSVDEWQTIKSGCNEIEKWVLNSDNVEFLEQIGPNSYKGFYNGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHRNILQFVGICVDDNHGLCVVTKFMEGGSVHDFLLKNKKIHAKDIIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYSALSPVQAAVGIAACGLRPEIPKDCPQTLKSIMTKCWNNTPSKRPQFSEILVLLLRPNSINR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151992g00001 553 Gene3D Transferase(Phosphotransferase) domain 1 356 458 - -
Stsc151992g00001 553 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 472 545 - -
Stsc151992g00001 553 MobiDBLite consensus disorder prediction 37 67 - -
Stsc151992g00001 553 MobiDBLite consensus disorder prediction 90 112 - -
Stsc151992g00001 553 MobiDBLite consensus disorder prediction 31 67 - -
Stsc151992g00001 553 Gene3D Transferase(Phosphotransferase) domain 1 459 551 - -
Stsc151992g00001 553 Pfam Protein tyrosine and serine/threonine kinase 469 543 IPR001245 GO:0004672|GO:0006468
Stsc151992g00001 553 Pfam Protein tyrosine and serine/threonine kinase 400 455 IPR001245 GO:0004672|GO:0006468
Stsc151992g00001 553 SUPERFAMILY Protein kinase-like (PK-like) 337 543 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151992g00001 Stsc-Chr151992 1191 5775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151992g00001 349 545 MAP Kinase Kinase Kinase AT4G35780 28.044 1.23e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Stsc151992g00001 PK_Tyr_Ser-Thr 3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151992g00001 - - adu:107458330 811.601