Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151990g00002 ATGGGAGAGGTGGCGAGTGGCGGCGGTTGTTGCCCTCCGATGGATCTGTTCCGCTCGGAGCCGATGCAGCTTGTTCAGCTCATCATTCCCATCGAATCCGCTCATCGCACTGTCTCCTACCTCGGCGACCTTGGCCTCCTTCAGTTCAAAGATCTCAATGCAGAGAAGAGCCCTTTTCAGCGGACTTATGCCACTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAGTTGCGTTTTTTCAAGGAGCAAATGTTGAAGGCTGGTGTTTCTCCAAAAATTTCCACAGCACATGTTGATCTGAACATTGATGATCTTGATGTCAAACTTACAGACATTGAAGCAGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGCACGTACAATGAACTTGTGGAGTACAAGCTCGTTCTGCAGAAGGCTGGTGAGTTTTTCCAGTCAGCTCAGAGCCGTGCCATAGAGCAACAGAGAGAATATGAATCACGCCAGTTGAGGGGTGAATCCATGGAAACACCTTTGTTGCAGGACCAAGAATTGCTGGGTGATTCAGGGAAGCCAGTTAAGTTGGGGTTTTTAGCTGGCCTTGTTCCCAGGGAAAGGTCCCAGGCATTTGAGAGAATTCTATTTCGTGCTACTAGAGGCAATGTGTTTCTGAGGCAGGCTGTTGTTGAGGATCCTGTCATAGATCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTTTTTGTTGTCTTCTATGCTGGTGAAAAAGCAAAAGCCAAGATTCTGAAAATATGCGATGCCTTTGGTGGTGATCGTTACCCTTTTGCTGAGGAACTTGGAAAACAAGCTCAAATGATTAAAGAGGTTTCAGGAAGGCTTTCAGAATTGAAGACTACTATAGATGCTGGATTGCTGCACCGGGAAAATTTGCTACAGGCTATTGGTGCTCAATTTGAGCAATGGAACCTTTTGGTGAGGAAGGAAAAATCAATTTACCATACCTTGAACATGCTAAGCCTTGATGTGACAAAAAAGTGTCTTGTGGCTGAAGGGTGGAGTCCTATTTTTGCATCAAAGCAGATTCAAGACGCATTAGAGCGGGCAGCAATTGATTCTAACTCTCAAGTTGGACCTGCGCACCATCACTATAAATGTGGGTTATCCCAGAAGGGTTTTCTTCTAGTCAGTATTCGTCCTGCAGTTCTCTTGAAAAATATAGCATTGAAGGTTGCTAAGTATCAGGAGGCAAATCCCACTGTGTATACTATAGTTACATTTCCATTTCTTTTTGCCGTAATGTTTGGTGATTGGGGGCATGGAATATGTTTGCTACTTGGAGCCCTTTATTTCATAATCAGGGAGAAGAAACTTTCTAGCCAGCTTGATGATATCACCGAAATGACTTTTGGAGGACGTTATGTTATTATGTTGATGGCACTCTTCTCAATCTACACTGGTTTGATATATAATGAGTTCTTTTCTGTTCCATTTGAACTCTTTGGTCCCTCTGCATATGCATGCCGTGACCTTTCTTGCAGTGATGCTACAATATCAGGCCTGGTAAAAGTGCGTCGCACTTACCCATTTGGAGTGGATCCTGTATGGCATGGAACCAGAAGTGAATTACCATTCCTAAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGGGTCGCACAAATGAATCTGGGAATTATTATGAGCTATTGCAATGCTCTATTCTTTCGGAGCAATGTAAATGTCTGGTGCCAATTTATTCCCCAGATAATATTTCTCAATGCGTTATTCGGCTATCTGTCCCTGCTTATTATTGTGAAGTGGTGCACTGGTTCTCAGGCTGATTTATACCATATAATGATCTACATGTTCCTGAGTCCAGCAGATGATTTGGGTGAGAACCAACTGTTTGTTGGTCAGAAATATCTGCAGATGACGCTTTTGCTTCTGGCCCTTATTGCTGTGCCCTGGATGCTGCTCCCAAAACCATTTATTTTAAAGAAGCAACACGAAGCCAGGCACGGGGATGAATCGTACACAGCTCTTCAAACCACAGAGGAAAGCTTGCAAGTGGAGTCAAATAATGATTCTCATGGTCATGAAGAGTTTGAGTTCAGTGAAGTTTTTGTCCATCAACTTATACATACCATAGAGTTTGTACTTGGAGCAGTCTCTAACACAGCTTCTTACCTTCGACTATGGGCCCTTAGTCTTGCCCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTACTTATGGCATGGGGGTACAATAATGTGATTATCCTGATAGTGGGTATCATTGTCTTCATTTTCGCCACTGTCGGAGTATTACTCGTCATGGAAACCCTGAGTGCCTTCTTGCATGCACTAAGGCTTCACTGGGTGGAGTTCCAAAACAAATTCTATGAGGGTGATGGATACAAGTTCCACCCCTTCTCGTTTGCATTGCTAGATGAAGAGGAGGATTGA 2457 0.4322 MGEVASGGGCCPPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNAEKSPFQRTYATQIKRCGEMARKLRFFKEQMLKAGVSPKISTAHVDLNIDDLDVKLTDIEAELTEMNANGEKLQRTYNELVEYKLVLQKAGEFFQSAQSRAIEQQREYESRQLRGESMETPLLQDQELLGDSGKPVKLGFLAGLVPRERSQAFERILFRATRGNVFLRQAVVEDPVIDPVSGEKTEKNVFVVFYAGEKAKAKILKICDAFGGDRYPFAEELGKQAQMIKEVSGRLSELKTTIDAGLLHRENLLQAIGAQFEQWNLLVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPIFASKQIQDALERAAIDSNSQVGPAHHHYKCGLSQKGFLLVSIRPAVLLKNIALKVAKYQEANPTVYTIVTFPFLFAVMFGDWGHGICLLLGALYFIIREKKLSSQLDDITEMTFGGRYVIMLMALFSIYTGLIYNEFFSVPFELFGPSAYACRDLSCSDATISGLVKVRRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNALFFRSNVNVWCQFIPQIIFLNALFGYLSLLIIVKWCTGSQADLYHIMIYMFLSPADDLGENQLFVGQKYLQMTLLLLALIAVPWMLLPKPFILKKQHEARHGDESYTALQTTEESLQVESNNDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYNNVIILIVGIIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFALLDEEED 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151990g00002 818 PANTHER VACUOLAR PROTON ATPASES 16 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Stsc151990g00002 818 Coils Coil 102 129 - -
Stsc151990g00002 818 Pfam V-type ATPase 116kDa subunit family 40 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Stsc151990g00002 818 PIRSF ATP6V0A1 12 818 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151990g00002 Stsc-Chr151990 954 10052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151990g00002 14 818 Primary Pumps ATPases(2) AT4G39080 74.536 0.0 1230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151990g00002 K02154 - mnt:21409548 1270.37