Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151981g00005 ATGAGGTTGTTATCGCATTCAATTCTTAACCCCCTCCTTCTCTCCGGCCTGCTTCTCTTTTGTCCCTCATTCTTCTTCTCTCTCGTCGCTGCTGACCCGGAGTCGGAGGCCGAGCCGGAGATTCTCCTCCGGGAAACCAATGCAACCTTCACCGGCAATGCCTCGCTTGCGAGATCCGGAGATGATAGCTTCGCCAACATGATTGATCGGGCGCTCGAGAGAGAGTTCCCCGAGAATGAGCAAAATGAAGGTAATGATGCTGGCGGTTTCAACAATAGTGTTGCTGAACAGCAGGCTGTTTTGGAAACTGTTGCTAGAGTTAAATCATTTCATATTCATGATGTTTTCTCTTTGAAAGATGAGAATCGTGCAGAGGATATGCCAACCTTAATTGATCGAAAGGATAATGTGTTTATCATCTCCAATCCCAAGTCAAAGTATCCTGTTCTTCAAGTAGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTTTTTGCAACATGTGGTGGCATTGCCTTTGCTTGTGCTGGACAACCGGTTATGACAGGATATCTGTTGGCAGGATCACTCATTGGACCTGGTGGCTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACTGTTGCTCAATTTGGTGTCATCTTTTTGCTTTTTGCATTGGGATTAGAGTTTTCAACAACAAAGCTTCGAGTTGTTCGAGCGGTGGCTATTGTGGGCGGTCTACTTCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTTCGTTATGTGGTGGTAAATCATCTGAAGGAATATTTGTAGGTGCATTTCTTTCTATGTCTTCGACAGCTGTGGTCTTGAAATTCTTGATGGAAAGGAATAGTGTCAATGCCCTTCATGGTCAGGTTACAATTGGAACACTGATTCTGCAGGATTGTGCTGTTGGTTTGCTCTTTGCGCTGCTTCCAGTATTGGGTGGAACATCAGGTGTTCTTCAGGGAGTAATATCCATGACTAAATCGTTGGTCATCTTAATTGCATTTTTGGCCGTTTTGTCGATAGTATCTCGTACTTGTGTGCCATGGTTTCTTAGGCTTATGATAAGCCTATCATCTCAGACCAATGAACTTTATCAATTGGCATCAGTGGCATTCTGCCTACTTGTTGCTTGGTGTAGTGATAAGTTGGGTTTAAGCCTCGAACTTGGTTCCTTCGCTGCGGGCGTGATGATATCAACAACAGATCTTGGTCAACATACACTAGAACAAGT 1256 0.4363 MRLLSHSILNPLLLSGLLLFCPSFFFSLVAADPESEAEPEILLRETNATFTGNASLARSGDDSFANMIDRALEREFPENEQNEGNDAGGFNNSVAEQQAVLETVARVKSFHIHDVFSLKDENRAEDMPTLIDRKDNVFIISNPKSKYPVLQVDLRLISDLVVVIVFATCGGIAFACAGQPVMTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAIVGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVISMTKSLVILIAFLAVLSIVSRTCVPWFLRLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151981g00005 419 Gene3D - 154 419 IPR038770 -
Stsc151981g00005 419 Pfam Sodium/hydrogen exchanger family 161 418 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc151981g00005 419 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 24 419 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151981g00005 Stsc-Chr151981 18575 22615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151981g00005 17 419 Antiporters AT2G19600 78.883 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151981g00005 K26735 - gmx:100788884 680.633