Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151971g00001 TTGAAACTATGTGTATGTAGGAACTACTACAAGTGTGTGAGTGAAGGCTGTAATGTGAGGAAACATGTGGAGAGAGCTGCACATGACATAAAGTCTGTGATCACAACCTATGAAGGCAAACACAACCATCAAGTTCCTGAACAACCATCCTTTCCAACTCGACACATATCTTTTACTCCCTTAACATCACTCAACAACTTCGCAACTTCTTCGTCGTCATCGTCGTCACCAAGGCTATCAAACAATCAAAACTCTTCATCAGATCAACAACCTAATAATCTTCCTTTGAGGATTGGAGGAATTCAGAATTTTGGTAGGTCATTGATTGGTACTAGTACTTCATATGCCAATGAGGGACAGGGACCAACCTCAAATAAATGA 381 0.4042 LKLCVCRNYYKCVSEGCNVRKHVERAAHDIKSVITTYEGKHNHQVPEQPSFPTRHISFTPLTSLNNFATSSSSSSSPRLSNNQNSSSDQQPNNLPLRIGGIQNFGRSLIGTSTSYANEGQGPTSNK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151971g00001 126 ProSiteProfiles WRKY domain profile. 7 46 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151971g00001 126 Gene3D WRKY domain 3 47 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151971g00001 126 SMART WRKY_cls 7 45 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151971g00001 126 SUPERFAMILY WRKY DNA-binding domain 6 46 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151971g00001 126 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 84 IPR044810 GO:0003700
Stsc151971g00001 126 Pfam WRKY DNA -binding domain 7 44 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151971g00001 126 MobiDBLite consensus disorder prediction 67 97 - -
Stsc151971g00001 126 MobiDBLite consensus disorder prediction 67 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151971g00001 Stsc-Chr151971 389 769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151971g00001 7 46 WRKY Transcription Factor Family AT5G56270 80.000 1.47e-18 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc151971g00001 WRKY 1.6e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151971g00001 K18835 K13424 cit:102620262 81.2629