LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc151965g00004	ATGGAAGCAGCCAGCAATTCCACCACTTCTAGTCATCTGCCGTCATCGCAAGTTGTCGCCGAGTTGTGTAAAGCATCACAGAACCCTAAATTTGCATCAGGTAGTGTTAAAGATGATGATGATTATTACATTGATTCTATAAAACAGGCACCTCCCAATGGGAGCCTCAAAGGTTTGGACGTAATTGAGACCATCAAATCCAAGTTTGAAGAAGCTTGCCTTGGAACTATTTCTTGTGCTGATATTCTTGTACTAGCTGCTAGAGACTCTATGGCTTTGATTGAGACTAATCAAAGGTTCCAGGCCAAAGCTCCCAAACTGCTACTTTAA	330	0.4212	MEAASNSTTSSHLPSSQVVAELCKASQNPKFASGSVKDDDDYYIDSIKQAPPNGSLKGLDVIETIKSKFEEACLGTISCADILVLAARDSMALIETNQRFQAKAPKLLL	109

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc151965g00004	109	Pfam	Peroxidase	45	94	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Stsc151965g00004	109	PRINTS	Plant peroxidase signature	76	86	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Stsc151965g00004	109	PRINTS	Plant peroxidase signature	57	70	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Stsc151965g00004	109	SUPERFAMILY	Heme-dependent peroxidases	32	94	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Stsc151965g00004	109	ProSiteProfiles	Plant heme peroxidase family profile.	23	109	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Stsc151965g00004	109	PANTHER	PEROXIDASE 25-RELATED	39	94	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Stsc151965g00004	109	Gene3D	-	12	105	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc151965g00004	Stsc-Chr151965	9884	11809	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc151965g00004	45	93	Peroxidase	AT5G17820	55.102	4.00e-12	59.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc151965g00004	K00430		-	aew:130755739	72.4034