Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151949g00002 ATGGATGAAGATAGCAGCAATTCTTGGATAAGGAGGGCTAAGTTCTCTCACACAGTGTGTCACCGATTGGAGTATTCCAGATTGGACTCTTTTCCTAGCAGCATTCAGCGCCAGCAGAACTCTGGGACTCTGAAATCAAGGCCTGCAGCAGCACAATCAGCGCCAGCGCCGGCGCCGGCTGCGGCACCTACAGTTCCTTATGATCTAAACCCTGTATCTAATGTGTCACAGGTTCACAGAAATCCAATAACGAATAAGCTGAGATCTTTGTCCCCTTTGCCGGTAACCCTTCTGTCCGATACCTTTAAGGAAGCCCAGCATGAACAGAAGAGGTTCTCAACTCCAACCACTCCACGGAGGAAAGACCAGGAGAAGAGAATTATGGGGAAATTAATGAACCGGGACTCTAAGGAGTCCAGAGAAACGAAGGTGTTGTCGACTTCAAAATCGCCTCATCGTAGTCCAAATGGGCAGCTTGCATCAATGAAATTGGGAGACAAGTCAAAGCACCGCAAGGAATCTGGGTGGACCAAGTATTTTGACCATGCTGGAGGAAGGGTCACTGCTGTGGAAACAGCTGAAGAGTGGACTGTGGACCTCTCTAAGCTGTTCCTTGGCCTCAGATTCGCCTATGGGGCTCACAGTCGGCTTTACCATGGTATGTACAACCAAGAGCCCGTTGCTGTGAAGATTATCCGGGTTCCAGATGATGACGAAAATGGAAACATGGCTTATCGATTGGAGAATCAGTTCATTAGAGAGGTCTCGCTTTTGTCACGCCTCCACCATCAGAATGTTATAAAGTTTGTAGCAGCGTGCAGAAAGCCACCTGTTTATTGTGTTATCACTGAATATCTAGCAGAAGGTTCCTTAAGGGCATATTTGCATAAATTGGAGAAAAAGACTATTTCTATGGAGAAGCTAATTGCTTTTGCTCTGGATATTGCACGCGGGATGGAATATATACACTCTCAAGGTGTCATTCATAGAGACCTTAAGCCAGAGAATGTCCTTATTAGCGAAGACTTTCACCTTAAAATTGCTGATTTTGGGATTGGTTGTGAGGAAGCATATTGTGACCTATTAGTTGATGACCCTGGTACGTACCGCTGGATGGCACCTGAGATGATCAAACGTAAATCCTATGGGAGAAAGGTTGATGTATATAGCTTTGGGCTTATCCTATGGGAAATGGTAACTGGAACAATACCATATGAGGATATGACTCCCATTCAGGCTGCTTTTGCAGTGGTAAATAGGAATTCAAGGCCTGTTATTCCTCCCAATTGCCCTCCTGCAATGCGCGCTTTAATCGAGCAATGTTGGTCTGTGCATCCAGACAAGAGGCCTGAGTTTTGGCAGGTTGTTAAGGTGTTAGAACAATTTGAATCATCACTTGCATTGGACGGAACCTTGACTCTACTTCAAAACCCTTTGTGTCAAGATCATAAGAAAGGTCTTCTTCATTGGATTCAAAAGCTTAGTCCTGCTCATCAAAATAGTGGTCCAGCACTTAAACCTAGATTCTCATGA 1533 0.4514 MDEDSSNSWIRRAKFSHTVCHRLEYSRLDSFPSSIQRQQNSGTLKSRPAAAQSAPAPAPAAAPTVPYDLNPVSNVSQVHRNPITNKLRSLSPLPVTLLSDTFKEAQHEQKRFSTPTTPRRKDQEKRIMGKLMNRDSKESRETKVLSTSKSPHRSPNGQLASMKLGDKSKHRKESGWTKYFDHAGGRVTAVETAEEWTVDLSKLFLGLRFAYGAHSRLYHGMYNQEPVAVKIIRVPDDDENGNMAYRLENQFIREVSLLSRLHHQNVIKFVAACRKPPVYCVITEYLAEGSLRAYLHKLEKKTISMEKLIAFALDIARGMEYIHSQGVIHRDLKPENVLISEDFHLKIADFGIGCEEAYCDLLVDDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNRNSRPVIPPNCPPAMRALIEQCWSVHPDKRPEFWQVVKVLEQFESSLALDGTLTLLQNPLCQDHKKGLLHWIQKLSPAHQNSGPALKPRFS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151949g00002 510 MobiDBLite consensus disorder prediction 34 65 - -
Stsc151949g00002 510 MobiDBLite consensus disorder prediction 104 168 - -
Stsc151949g00002 510 Gene3D Phosphorylase Kinase; domain 1 191 286 - -
Stsc151949g00002 510 Gene3D Transferase(Phosphotransferase) domain 1 287 483 - -
Stsc151949g00002 510 CDD STKc_MAP3K-like 212 459 - -
Stsc151949g00002 510 MobiDBLite consensus disorder prediction 34 48 - -
Stsc151949g00002 510 Pfam Protein tyrosine and serine/threonine kinase 211 459 IPR001245 GO:0004672|GO:0006468
Stsc151949g00002 510 ProSiteProfiles Protein kinase domain profile. 203 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151949g00002 510 SMART serkin_6 203 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151949g00002 510 SUPERFAMILY Protein kinase-like (PK-like) 186 459 IPR011009 -
Stsc151949g00002 510 PRINTS Tyrosine kinase catalytic domain signature 367 377 IPR001245 GO:0004672|GO:0006468
Stsc151949g00002 510 PRINTS Tyrosine kinase catalytic domain signature 283 296 IPR001245 GO:0004672|GO:0006468
Stsc151949g00002 510 PRINTS Tyrosine kinase catalytic domain signature 386 408 IPR001245 GO:0004672|GO:0006468
Stsc151949g00002 510 PRINTS Tyrosine kinase catalytic domain signature 321 339 IPR001245 GO:0004672|GO:0006468
Stsc151949g00002 510 PRINTS Tyrosine kinase catalytic domain signature 430 452 IPR001245 GO:0004672|GO:0006468
Stsc151949g00002 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 327 339 IPR008271 GO:0004672|GO:0006468
Stsc151949g00002 510 FunFam serine/threonine-protein kinase HT1 288 481 - -
Stsc151949g00002 510 MobiDBLite consensus disorder prediction 104 147 - -
Stsc151949g00002 510 FunFam Serine/threonine-protein kinase isoform 1 193 287 - -
Stsc151949g00002 510 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 60 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151949g00002 Stsc-Chr151949 8237 12069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151949g00002 1 498 MAP Kinase Kinase Kinase AT5G58950 57.227 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc151949g00002 PK_Tyr_Ser-Thr 9.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151949g00002 - - gmx:100784454 777.319