Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151946g00004 ATGCCAGCCCGGAATTCCTACCATCTAAACCAGAAAAGGGTATGGAGATTTGTGGGATTTATGTCAAGTGTCAATGGATTTCTCTGTTATGCTATGAGCTCCTCTTTCAAACATCTATTTGGAGAGTGGAACTTGTTGAAGATCATTGTTTACACTCTATTAAGTTTCAGCATCAGCACCATTATGCTATTTCCCAAGAAATGGAGGCTTTCAAGGAGCTTCTTGCTTAAAGCTTATGCAGGTGTTCTAGTTTTGCTAATAACCTCTGTCTACTCATTTTTCTCTGATAAATCTAACAATGGAAAACCTGACCTGCTAGCCATTTTTTCAAGTGCTTCTTTTGCTTTGATGTCTTTGTCCCTCTCAAGGCAAATTGATCTCGGCTTTGAATCTGAGCTCCTTAGTTTCTTCCTTGGATGCCTAACTGTTCAACTCATGAAGATCAACTTGATGCTTTCCATCGTTGCAGCCATCTTTTGCTACTCTCTCATGATTGTTCGTTCCAAATGGGAATCTCAACTGCATGTTAGAACACCAAGAATGCAAGACCATGTAACAGTAGAAATCGATACTGCAAATGGAGTAGTTGAAAGAAGAGATGATGACTACTTAAATTCCTTTCAATACCTCGAACTACAAAATGAAGATGATGGATGCAATTGGAGAAAATATGAAGAGAAACCACTGAGAGGAAGGAGAATTCAGATAAGCTACTACAGATGCGCATACCCGAATTGCAAGGTTAAGAAGAAAGTAGAGAGAACAATAGGTGGGGAAATTATTCATGTAAACTATAAAGGTACCCATGTCCACCATTTTTGCAAGCCTATTATGAAGAGGAACTCATCATCTGAATCTTTTTATTCACTTCTCCCTTCTGAGCCTTCCCACGCTGAAATCATAGATCAATCATTGGCCTCCAATGGCAATGGAAAATTGAATCATGTTACAGAAGAACCAGAGAGCTCATCATTATCAATATGA 984 0.3882 MPARNSYHLNQKRVWRFVGFMSSVNGFLCYAMSSSFKHLFGEWNLLKIIVYTLLSFSISTIMLFPKKWRLSRSFLLKAYAGVLVLLITSVYSFFSDKSNNGKPDLLAIFSSASFALMSLSLSRQIDLGFESELLSFFLGCLTVQLMKINLMLSIVAAIFCYSLMIVRSKWESQLHVRTPRMQDHVTVEIDTANGVVERRDDDYLNSFQYLELQNEDDGCNWRKYEEKPLRGRRIQISYYRCAYPNCKVKKKVERTIGGEIIHVNYKGTHVHHFCKPIMKRNSSSESFYSLLPSEPSHAEIIDQSLASNGNGKLNHVTEEPESSSLSI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151946g00004 327 ProSiteProfiles WRKY domain profile. 210 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151946g00004 327 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 208 289 IPR044810 GO:0003700
Stsc151946g00004 327 MobiDBLite consensus disorder prediction 308 327 - -
Stsc151946g00004 327 SMART WRKY_cls 215 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151946g00004 327 Gene3D WRKY domain 207 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151946g00004 327 Pfam WRKY DNA -binding domain 216 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151946g00004 327 SUPERFAMILY WRKY DNA-binding domain 210 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151946g00004 Stsc-Chr151946 20622 21605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151946g00004 196 271 WRKY Transcription Factor Family AT2G38470 43.421 1.85e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc151946g00004 WRKY 1.7e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151946g00004 - - gmx:102667674 351.288