Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151946g00004 | ATGCCAGCCCGGAATTCCTACCATCTAAACCAGAAAAGGGTATGGAGATTTGTGGGATTTATGTCAAGTGTCAATGGATTTCTCTGTTATGCTATGAGCTCCTCTTTCAAACATCTATTTGGAGAGTGGAACTTGTTGAAGATCATTGTTTACACTCTATTAAGTTTCAGCATCAGCACCATTATGCTATTTCCCAAGAAATGGAGGCTTTCAAGGAGCTTCTTGCTTAAAGCTTATGCAGGTGTTCTAGTTTTGCTAATAACCTCTGTCTACTCATTTTTCTCTGATAAATCTAACAATGGAAAACCTGACCTGCTAGCCATTTTTTCAAGTGCTTCTTTTGCTTTGATGTCTTTGTCCCTCTCAAGGCAAATTGATCTCGGCTTTGAATCTGAGCTCCTTAGTTTCTTCCTTGGATGCCTAACTGTTCAACTCATGAAGATCAACTTGATGCTTTCCATCGTTGCAGCCATCTTTTGCTACTCTCTCATGATTGTTCGTTCCAAATGGGAATCTCAACTGCATGTTAGAACACCAAGAATGCAAGACCATGTAACAGTAGAAATCGATACTGCAAATGGAGTAGTTGAAAGAAGAGATGATGACTACTTAAATTCCTTTCAATACCTCGAACTACAAAATGAAGATGATGGATGCAATTGGAGAAAATATGAAGAGAAACCACTGAGAGGAAGGAGAATTCAGATAAGCTACTACAGATGCGCATACCCGAATTGCAAGGTTAAGAAGAAAGTAGAGAGAACAATAGGTGGGGAAATTATTCATGTAAACTATAAAGGTACCCATGTCCACCATTTTTGCAAGCCTATTATGAAGAGGAACTCATCATCTGAATCTTTTTATTCACTTCTCCCTTCTGAGCCTTCCCACGCTGAAATCATAGATCAATCATTGGCCTCCAATGGCAATGGAAAATTGAATCATGTTACAGAAGAACCAGAGAGCTCATCATTATCAATATGA | 984 | 0.3882 | MPARNSYHLNQKRVWRFVGFMSSVNGFLCYAMSSSFKHLFGEWNLLKIIVYTLLSFSISTIMLFPKKWRLSRSFLLKAYAGVLVLLITSVYSFFSDKSNNGKPDLLAIFSSASFALMSLSLSRQIDLGFESELLSFFLGCLTVQLMKINLMLSIVAAIFCYSLMIVRSKWESQLHVRTPRMQDHVTVEIDTANGVVERRDDDYLNSFQYLELQNEDDGCNWRKYEEKPLRGRRIQISYYRCAYPNCKVKKKVERTIGGEIIHVNYKGTHVHHFCKPIMKRNSSSESFYSLLPSEPSHAEIIDQSLASNGNGKLNHVTEEPESSSLSI | 327 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151946g00004 | 327 | ProSiteProfiles | WRKY domain profile. | 210 | 274 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc151946g00004 | 327 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 208 | 289 | IPR044810 | GO:0003700 | |
Stsc151946g00004 | 327 | MobiDBLite | consensus disorder prediction | 308 | 327 | - | - | |
Stsc151946g00004 | 327 | SMART | WRKY_cls | 215 | 273 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc151946g00004 | 327 | Gene3D | WRKY domain | 207 | 274 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc151946g00004 | 327 | Pfam | WRKY DNA -binding domain | 216 | 271 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc151946g00004 | 327 | SUPERFAMILY | WRKY DNA-binding domain | 210 | 272 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151946g00004 | Stsc-Chr151946 | 20622 | 21605 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151946g00004 | 196 | 271 | WRKY Transcription Factor Family | AT2G38470 | 43.421 | 1.85e-16 | 78.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Stsc151946g00004 | WRKY | 1.7e-15 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151946g00004 | - | - | gmx:102667674 | 351.288 |