Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151946g00003 ATGATGCTTAGGACCCTGCTCATCCAAACTCAAAGATACCTCATGCAGCCACGTGTATGGAGATTACTGGGTTTCGCATCAACCCTTCTTGGACTCATTTCCTACGCTCTCAGCTCCTCCTTCTACCAACTCTTCGGTGGTTGGACTTCACTCAAAATCTTTGCTTATATCATCTTCAGTTTCATCCTTTCTCTCGTGATCTTGTTTCCAAAATTATGGCAACAACTAAGGGGCCTCAACTTTGAAGCTCACATGGCCTTCTTCGTTTTGACAATCACCTCTCTCTATTCCTACTTTTCCGATAAAGCCATGAAAGGGAAGCCAGATGCTTATAGCGTAACATCCTATGCTGCTTTTGCTGTTACATCACTTAGCTTGCAGAGGCAGAATGCACTTGCAAAAAACCGGTATCAAAGATTCAAAGATGAGAATCATCTTCTTGTTCAAGTGAATATGAATCCATTGCTAGCTAAAAATGATCTTAATAGCAATCTTGTTAGCAGTAATAATATGCCTCAAAATACTCAGCAGCTGGATGAACAGGTGGCTATTGAAGCTAATGTCTTGCCGAGTATGGAGGACTGTAGGTGGGCTAATTTGGCTGCTGTGAACATGCTTAAGTGTAATTTGAACAAATACCTTCAAGATAAGGTTTATCGGATTCCAGAAGTACTAGTGAATGATCATAACTTCCTCATTGATGAGCTTCCATTACAATTAGTTAGTGACCTTCATGAAAAAGTGAAGCTCATGATCCAAAAGGGGTTTGAGAAGTTGTGTGTGGACCAATACTGCAGTTGGAGGAGAGAGTTCTTAGATTTGGTGGGGAAGGAGTTTAGCACGCAAGAAATAGAAGAGAAGGGGAGGATTAAGAGTTGGATTAAAGTTTCCAATGTTTCTCTTAAAATATTGTTTCCAAATGAAAGGAGACTCTGTGATCGCATCTTCTTGGGTTTTCCTTCCGTTGCCGATCGTTCTTTCGCACAGATTTGCGGTGAATTCACCTCTAATCTGCTAGATTTTGGCAATTGTTTTGCTAACGGTAGCCATCCACTAAATCTTTTTCCCAGCGTCCTCCAAGTGTTCGGTGTATTGCATGAACTAATTCCGGAGTTTGAGTCAGTTTTTTTGGACCAATTCAGTGCATCGCTTAGGACTGAAGCAGTCACGACCAGAAAGAGACTAAGGGAAACAATCAACGAGATGTTCACGCAGCTCGAGAATTTGATAAATTGTGATGCATCAGAAGTAGCTTGTCCTGGAGGTATTTGCCCTGTTTCCGTTGAAGTGATGAACCATCTTAGTAAGGTTGGAGAATTTGGGTCTTCTTCGCTTTCTGGGGAGGTAACTAGAATAATTGCATTGTTGGAAAGCCATCTGGAAGCCAAGTCCAAACATTACAGTAACCCTGCTTTGGGCTTTGTTTTCTTGATGAATAATGAGAGGTACATTGAAAAGAAGGCAAAACAATATCAATTGGATAAGATTTTGGGCAATCAATGGATCCGGCAAAGAACTGCTAAAGTCCGAGATAACTGTGAACCCTATAGAAGAAGTTCGTGGGAAGAGGTGTTAGGCTTTTTGAAACTTGGCACGGAGGAAATTGAAGAAGCAGAGTCAATGAAGAAGAAGCTCAATCTATTCAACCTGCATTTTAACCAGATATGGAGGGATCAGAGTGCATGGTTTATCCACGACGAAGAGTTAAAGGAAGAGATAATAACACCGCTGGGAAAGATCATATCTCATACCTATGGATTGTTCATTTGGCGTTTCAACTATGTGCTTGGTAAGGATGCTAATGAGTTTATAAAGTATTCAGTTTTAGAAATTGAAGACTTACTGAAGGATTTATTTGGCTGGAGAGATGAAAAACTAGCAGAAATGAGAGATTAA 1896 0.4061 MMLRTLLIQTQRYLMQPRVWRLLGFASTLLGLISYALSSSFYQLFGGWTSLKIFAYIIFSFILSLVILFPKLWQQLRGLNFEAHMAFFVLTITSLYSYFSDKAMKGKPDAYSVTSYAAFAVTSLSLQRQNALAKNRYQRFKDENHLLVQVNMNPLLAKNDLNSNLVSSNNMPQNTQQLDEQVAIEANVLPSMEDCRWANLAAVNMLKCNLNKYLQDKVYRIPEVLVNDHNFLIDELPLQLVSDLHEKVKLMIQKGFEKLCVDQYCSWRREFLDLVGKEFSTQEIEEKGRIKSWIKVSNVSLKILFPNERRLCDRIFLGFPSVADRSFAQICGEFTSNLLDFGNCFANGSHPLNLFPSVLQVFGVLHELIPEFESVFLDQFSASLRTEAVTTRKRLRETINEMFTQLENLINCDASEVACPGGICPVSVEVMNHLSKVGEFGSSSLSGEVTRIIALLESHLEAKSKHYSNPALGFVFLMNNERYIEKKAKQYQLDKILGNQWIRQRTAKVRDNCEPYRRSSWEEVLGFLKLGTEEIEEAESMKKKLNLFNLHFNQIWRDQSAWFIHDEELKEEIITPLGKIISHTYGLFIWRFNYVLGKDANEFIKYSVLEIEDLLKDLFGWRDEKLAEMRD 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151946g00003 631 SUPERFAMILY Cullin repeat-like 202 619 IPR016159 -
Stsc151946g00003 631 Gene3D Exocyst complex component Exo70 198 625 - -
Stsc151946g00003 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 127 619 IPR004140 GO:0000145|GO:0006887
Stsc151946g00003 631 Pfam Exo70 exocyst complex subunit 291 617 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151946g00003 Stsc-Chr151946 17631 19741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151946g00003 226 619 EXO70 exocyst subunit family AT5G58430 42.890 8.22e-96 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151946g00003 - - adu:107458262 1009.21