Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151946g00002 ATGGCATTTTTAGTTCTGACGATTACTTCTGTTTACTCATTCTTTTTTGATAAAGCTGTGAATGGGAAACCAGATGCATATAGCGTAGTCTCTTGTGCTGCTTTTGCTATTATGTTGTTTAGTTTGTCGAGACAGATCCACTGCGGATTTGAAGTGGATCTTCTATATTTCTTTCTTGGAGTTTTTATTGTTCAACTGATGAAGATAAAACTGTTGTTAGGCATTGTTGGGGTCTGTTTCAGTTATTTCCTTATTATTCTTAGGTCTTCTCTAAACCTCATATTAGAAGATGAATATTTTGAACACAGTGATCAAAATCAGGTGGTCATGATTCAAGTTGATTCGCAGCAATCCAATGATGGTAGCAGTTTTACGATGCAGCGGTTAAGTGCTTATATAGAAAGGCAACAGCGGAGAGACTATGCTATCATCGACAAAATTCTGTACCAAGCAAGGAGATACAGTAAATCCATTGATGGACCCGGAAAGGTGACTGACCACAATTTGGTGGCTGATGCACTTGGACACTTAGCTATGAAGGACCTTCAAGATGTTGCCAAGTCCGCCATGGCTGCTGGTTTCGAAAGCCAGTTCTTCGACGCATATAGCAATTGCAGGAGTCAATGGTTAGAGACGTGCATATTGAGATTGTTACAACTTCCAAAGAATACAGTTATTGACCCTCTAACCATGCCATCAATGGATGAAATTATTAGTAGATGGATCAAAGTTTCCGAGGTTGCTCTAAGGATACTATTTCCCTCTGAAAGGCAAATATGCAATCGTGTCTTCCCTGGTCTACACTCTGCAGCGGATGCTTATTTTGCACAGATTTGCTCTGAAGCAACAATTCAGCTGCTGAAATTCGCAGAGGCTTTCGCGACTATTAGCCTTCCATCATATCAAATGTTCCATACCTTACATGTCTTTCTGACACTGAACCAAATGATTCCGAACTTCCAGACATTGTTTTCTGATGACCCCAGCTTGTTCTTGGTGAATGAAGCTGTCGCAACCCAGAAAAAATTGAGAGAAACAATAACAATCACAGGTTCCTACACGGATATGAAGAAATTGATTTTCTGTAGCAAGGAGGGTAAAGTAGTTCTTCCAAATGGTGGGGTTCATCCAATTACCTATCATGTAATGACATATATCCTATTCTTATGGCAGTCGCAAAAGAAGCTGCAGCTCGTTTCACTAGAACACCAGATGGATGCTGGAACGGGATCTTCTTTATCTGTGAATATTATTTTGTTGTTGCAGCTATTAGAGAGAAAATTGAGAACCAACTCCAAGAAGTACAAGGACCCTGCTTTGGGCTATTTTTTCATGATGAATAATAGGAGTTACATAGAAAACAAGGTAAAAAAGTGGGAGTTGGGAACCTTTGTGGGAGATCATTGGGCCCAAAATAACACTGCAAAACTCAAGCAAAACCTTGAGCTTTATTACAGAAGCTCATGGAACAAGTTGCTAAACTATCTGAATCTAGACTACTCCAGCGAGTCGCTGGCACCTGAAGTTGCCACAGAGTCAATGAAAAATAAGCTGCTCTTGTTCAACTCAAATTTCATGAAGACATGCATTGTTCAATCTACATGGTCCGTCTTTGACGAGCAGCTAAGGGAAGAAATTAGGACTTCCATTAAAAACATGTTGCTTCCAGCATATGGAAACTTCATTGGGAAGATCCGTAAATTTCTTGGTATGAATGCTTATGAATATATAAAGTATAGAATGCCTGACATTGAAGCTCGAATTGACGCTTTGTTTTATGGAAGCATCATGAATCGTTGA 1800 0.3961 MAFLVLTITSVYSFFFDKAVNGKPDAYSVVSCAAFAIMLFSLSRQIHCGFEVDLLYFFLGVFIVQLMKIKLLLGIVGVCFSYFLIILRSSLNLILEDEYFEHSDQNQVVMIQVDSQQSNDGSSFTMQRLSAYIERQQRRDYAIIDKILYQARRYSKSIDGPGKVTDHNLVADALGHLAMKDLQDVAKSAMAAGFESQFFDAYSNCRSQWLETCILRLLQLPKNTVIDPLTMPSMDEIISRWIKVSEVALRILFPSERQICNRVFPGLHSAADAYFAQICSEATIQLLKFAEAFATISLPSYQMFHTLHVFLTLNQMIPNFQTLFSDDPSLFLVNEAVATQKKLRETITITGSYTDMKKLIFCSKEGKVVLPNGGVHPITYHVMTYILFLWQSQKKLQLVSLEHQMDAGTGSSLSVNIILLLQLLERKLRTNSKKYKDPALGYFFMMNNRSYIENKVKKWELGTFVGDHWAQNNTAKLKQNLELYYRSSWNKLLNYLNLDYSSESLAPEVATESMKNKLLLFNSNFMKTCIVQSTWSVFDEQLREEIRTSIKNMLLPAYGNFIGKIRKFLGMNAYEYIKYRMPDIEARIDALFYGSIMNR 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151946g00002 599 PANTHER EXOCYST COMPLEX PROTEIN EXO70 131 593 IPR004140 GO:0000145|GO:0006887
Stsc151946g00002 599 SUPERFAMILY Cullin repeat-like 166 592 IPR016159 -
Stsc151946g00002 599 Pfam Exo70 exocyst complex subunit 239 589 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc151946g00002 599 Gene3D Exocyst complex component Exo70 92 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151946g00002 Stsc-Chr151946 15101 16964 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151946g00002 164 599 EXO70 exocyst subunit family AT5G58430 42.630 2.43e-102 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151946g00002 - K07195 adu:107458221 895.575