LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc151946g00002	ATGGCATTTTTAGTTCTGACGATTACTTCTGTTTACTCATTCTTTTTTGATAAAGCTGTGAATGGGAAACCAGATGCATATAGCGTAGTCTCTTGTGCTGCTTTTGCTATTATGTTGTTTAGTTTGTCGAGACAGATCCACTGCGGATTTGAAGTGGATCTTCTATATTTCTTTCTTGGAGTTTTTATTGTTCAACTGATGAAGATAAAACTGTTGTTAGGCATTGTTGGGGTCTGTTTCAGTTATTTCCTTATTATTCTTAGGTCTTCTCTAAACCTCATATTAGAAGATGAATATTTTGAACACAGTGATCAAAATCAGGTGGTCATGATTCAAGTTGATTCGCAGCAATCCAATGATGGTAGCAGTTTTACGATGCAGCGGTTAAGTGCTTATATAGAAAGGCAACAGCGGAGAGACTATGCTATCATCGACAAAATTCTGTACCAAGCAAGGAGATACAGTAAATCCATTGATGGACCCGGAAAGGTGACTGACCACAATTTGGTGGCTGATGCACTTGGACACTTAGCTATGAAGGACCTTCAAGATGTTGCCAAGTCCGCCATGGCTGCTGGTTTCGAAAGCCAGTTCTTCGACGCATATAGCAATTGCAGGAGTCAATGGTTAGAGACGTGCATATTGAGATTGTTACAACTTCCAAAGAATACAGTTATTGACCCTCTAACCATGCCATCAATGGATGAAATTATTAGTAGATGGATCAAAGTTTCCGAGGTTGCTCTAAGGATACTATTTCCCTCTGAAAGGCAAATATGCAATCGTGTCTTCCCTGGTCTACACTCTGCAGCGGATGCTTATTTTGCACAGATTTGCTCTGAAGCAACAATTCAGCTGCTGAAATTCGCAGAGGCTTTCGCGACTATTAGCCTTCCATCATATCAAATGTTCCATACCTTACATGTCTTTCTGACACTGAACCAAATGATTCCGAACTTCCAGACATTGTTTTCTGATGACCCCAGCTTGTTCTTGGTGAATGAAGCTGTCGCAACCCAGAAAAAATTGAGAGAAACAATAACAATCACAGGTTCCTACACGGATATGAAGAAATTGATTTTCTGTAGCAAGGAGGGTAAAGTAGTTCTTCCAAATGGTGGGGTTCATCCAATTACCTATCATGTAATGACATATATCCTATTCTTATGGCAGTCGCAAAAGAAGCTGCAGCTCGTTTCACTAGAACACCAGATGGATGCTGGAACGGGATCTTCTTTATCTGTGAATATTATTTTGTTGTTGCAGCTATTAGAGAGAAAATTGAGAACCAACTCCAAGAAGTACAAGGACCCTGCTTTGGGCTATTTTTTCATGATGAATAATAGGAGTTACATAGAAAACAAGGTAAAAAAGTGGGAGTTGGGAACCTTTGTGGGAGATCATTGGGCCCAAAATAACACTGCAAAACTCAAGCAAAACCTTGAGCTTTATTACAGAAGCTCATGGAACAAGTTGCTAAACTATCTGAATCTAGACTACTCCAGCGAGTCGCTGGCACCTGAAGTTGCCACAGAGTCAATGAAAAATAAGCTGCTCTTGTTCAACTCAAATTTCATGAAGACATGCATTGTTCAATCTACATGGTCCGTCTTTGACGAGCAGCTAAGGGAAGAAATTAGGACTTCCATTAAAAACATGTTGCTTCCAGCATATGGAAACTTCATTGGGAAGATCCGTAAATTTCTTGGTATGAATGCTTATGAATATATAAAGTATAGAATGCCTGACATTGAAGCTCGAATTGACGCTTTGTTTTATGGAAGCATCATGAATCGTTGA	1800	0.3961	MAFLVLTITSVYSFFFDKAVNGKPDAYSVVSCAAFAIMLFSLSRQIHCGFEVDLLYFFLGVFIVQLMKIKLLLGIVGVCFSYFLIILRSSLNLILEDEYFEHSDQNQVVMIQVDSQQSNDGSSFTMQRLSAYIERQQRRDYAIIDKILYQARRYSKSIDGPGKVTDHNLVADALGHLAMKDLQDVAKSAMAAGFESQFFDAYSNCRSQWLETCILRLLQLPKNTVIDPLTMPSMDEIISRWIKVSEVALRILFPSERQICNRVFPGLHSAADAYFAQICSEATIQLLKFAEAFATISLPSYQMFHTLHVFLTLNQMIPNFQTLFSDDPSLFLVNEAVATQKKLRETITITGSYTDMKKLIFCSKEGKVVLPNGGVHPITYHVMTYILFLWQSQKKLQLVSLEHQMDAGTGSSLSVNIILLLQLLERKLRTNSKKYKDPALGYFFMMNNRSYIENKVKKWELGTFVGDHWAQNNTAKLKQNLELYYRSSWNKLLNYLNLDYSSESLAPEVATESMKNKLLLFNSNFMKTCIVQSTWSVFDEQLREEIRTSIKNMLLPAYGNFIGKIRKFLGMNAYEYIKYRMPDIEARIDALFYGSIMNR	599

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc151946g00002	599	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	131	593	IPR004140	GO:0000145\|GO:0006887
	Stsc151946g00002	599	SUPERFAMILY	Cullin repeat-like	166	592	IPR016159	-
	Stsc151946g00002	599	Pfam	Exo70 exocyst complex subunit	239	589	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Stsc151946g00002	599	Gene3D	Exocyst complex component Exo70	92	599	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc151946g00002	Stsc-Chr151946	15101	16964	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc151946g00002	164	599	EXO70 exocyst subunit family	AT5G58430	42.630	2.43e-102	321

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc151946g00002	-		K07195	adu:107458221	895.575

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