Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151914g00001 ATGAGGGTGAAGATTGCCTTGTTAGAGAAAGGAATTGAAGTCCAATACAAGGAAGAAAAAGATGTATTTGAAGATAAAAACAAGAGTGAATTACTCCTTAACTCAAATCCAATTCATAAGAAGGTTCCAGTGCTCATTCACAATGGCAAAACCATCTGTGAGTCCCTCATCATTCTTGAATACATTGATGAGGTTTGGAAGCAAGAACAGCAGTTGTTCTCTGCTGATCCTTATTGCAGAGCCAATGCCAGGTTTTGGATTGATTTCTTTGACAAAAAGATAACTAGCTGTGCCAAGAAGTTATGGGCTAGCAAGGGAGAAGAGCAAGGGGCTGCAAAGGAAGAGTTTTTGGAGTTCTTGAAAGTCTTGGAAAATGAACTTGGAGAGAAGCCTTATTTTGGAGGTGACCATTTTGCCCTTCTGGATATTGCATTGATACCAATCACATGCAGGTTTTACACATATGAGAAGTTATGCAAATTTAGTGTGGAGGAAGAGTGTCCCAAGTTGATGGAATGGGTCAGAAGATGCAACATGAGAGACAGTGTTTCTAAGACCCTTCCTGATCCATTGAAGGTCTTTGACTTTGTGTTGGAGGTTAAGAAAAGAGAAGAAAATAGTGATAGTGAAGATGATTTCGAGGCCAACTGTGGATTCAACAACGAGAATGTGGGAGAAGAGGAGGAAGCGAACACAGTTGGGCAGATAGCGATGGAAGTGATCCACAATAGCGTGAGAGGGCCATCCACCTCCTTACTTGAGAATCGGAATGCTCGACATAAAGCCCTATAA 792 0.4141 MRVKIALLEKGIEVQYKEEKDVFEDKNKSELLLNSNPIHKKVPVLIHNGKTICESLIILEYIDEVWKQEQQLFSADPYCRANARFWIDFFDKKITSCAKKLWASKGEEQGAAKEEFLEFLKVLENELGEKPYFGGDHFALLDIALIPITCRFYTYEKLCKFSVEEECPKLMEWVRRCNMRDSVSKTLPDPLKVFDFVLEVKKREENSDSEDDFEANCGFNNENVGEEEEANTVGQIAMEVIHNSVRGPSTSLLENRNARHKAL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151914g00001 263 SUPERFAMILY GST C-terminal domain-like 64 201 IPR036282 -
Stsc151914g00001 263 CDD GST_C_Tau 77 199 IPR045074 GO:0004364|GO:0006749
Stsc151914g00001 263 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 70 IPR004045 -
Stsc151914g00001 263 Gene3D - 76 206 - -
Stsc151914g00001 263 SFLD Main.3: Omega- and Tau-like 1 206 IPR045073 -
Stsc151914g00001 263 SUPERFAMILY Thioredoxin-like 1 94 IPR036249 -
Stsc151914g00001 263 SFLD Main (cytGST) 1 206 - -
Stsc151914g00001 263 CDD GST_N_Tau 1 66 - -
Stsc151914g00001 263 Gene3D Glutaredoxin 1 74 - -
Stsc151914g00001 263 Pfam Glutathione S-transferase, N-terminal domain 1 64 IPR004045 -
Stsc151914g00001 263 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 193 IPR045073 -
Stsc151914g00001 263 FunFam Glutathione S-transferase U20 76 207 - -
Stsc151914g00001 263 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 76 196 IPR010987 -
Stsc151914g00001 263 Pfam Glutathione S-transferase, C-terminal domain 111 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151914g00001 Stsc-Chr151914 8815 11808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151914g00001 1 203 Glutathione S-transferase Gene Family AT1G78380 56.158 2.57e-81 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151914g00001 K00799 - mnt:21390803 286.574