Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151907g00001 ATGGCTGCAAAACTTGAAGGTGAAGCTTATCTCTCTTCATTTGTTGATGCTATTTCAAAGAAGCTGTCTTCATTACTTGAACATGACTCTGTCCTCCAAGGAAACGACTCTGACCTGAAGTTGCTAAGAGTGTTAGATGATTGTCTGTGTGATATTGAACCCGTGCTTCTTGATGCTGAGCTGAAGCAGTTCCGTAACGAGAGAGTGAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATTTGGCTGATGACTTCCTCGATGAACTCTCCACTAAAGCTGCCACTCGAACGGATCAAGGTGAGTCTCATGACTGGTCTTGCGCTGTTGACTTAATTATTGATGATTGTGGTGTCAAAGCCATCGAAGAAATAGTTGGCACACTAGTGTATGTTGTACAACAAAAAGGTAAACTTGGTCTGGAAAAGATCGCCAAGTTGGAAATCTCGTCATGGAGAATTCCATCAACGTCTCTTGTTGTTAGTTCTGACATATTTGGTCGGAGCAAAGACAAGGATAACGTAATCAAATTGTTGTTAGATGATATCTGCGATGCCGAATCACGTGTGACTGTGATCCCTATTGTGGGTATGGGCGGAATAGGAAAAACTACTTTAGCTCAATTGGTTTACAATGATGCCAATGTCATGGGAAAATTTGACACACGAGCATGGGTGTGTGTTGCCGAAAGTCCTAACCCTATTAATGTCACAAAGACAATAATAGGGGCAATAGATTCTTCTCCTTGTAACATGGATCATTTTGATTCACTTCAGACTAATTTGAAGCAAAAGTTGTCTGGAAAGACATTTTTGGTTGTTTTAGATGATGTCTGGAATGATGAACAAGACACGTGGGAGGAATTTTTAAAACCTTTTCGATATGGGAATAATGGGAGTAAGATTCTCCTAACAACCCGTAGTGAAAAGGTGGCTTCTGTGTTCGCAGCTAACAATCTACACTACCAACTAAGTTTATTGTCGGAGGAAGATTGTTGGTCCGTGTTTTTGAAGCATTCATCTATTTCTACTGATACTAGAGAATATGCAACTCTAGAACCAATTGGTAGAAAAATTGTTGAAAAATGTAAAGGGTTACCTTTAGCTCTGAAGACACTTGGGGGTTTATTGCGGAATAAAGATAATGTAGGAGATTGGGAGAATATACTTGAGAGTGAAATTTGGGAACTCTCCGAAGATGAGAGTAAAATCGTTCCTGCATTAAGAGTTAGTTATCACTATCTCCCTTCACATTTAAAGCGTTGTTTTGTTTATTGCTCATTATATCCTGAAGATTATCAATTTGATAAAGGCGAGTTGATTTTGTTATGGATGGCCGAAGATCTTTTACAATCAAAGAAAAATAACACATTAGAAAATATTGGTGGTGCCTATTTTGATGAATTGGTTGCAAGGTCATTTTTTCAACGTTCCAGTAATAATGAAAACTTATTTGTAATGCATGATCTCATACATGATCTAGCAACATTTTTAGCTGGAAAATTTTATTTCAAACTGCAAAAAATTGGCAATCTACACATGATAGACAATAAAGCTCGTCATTTGTCTTTTCATGCAAAATGTGAGGATAGCATCGAAATATTTCGAGAGGCCTCTAATAGAGCAGCACACACAAGAACAATGTTAAATCTTCAACATTATTGTGAATCAGTGGATGTTAAAAGGAATCCTGAGCTCTTAGGACAACATGTGAGAGTTTTGTCATTTCCTATAAAGTCATTGCCAGATTCAATTGGTGAATGGATCAGTTTGCGTTATTTGAATCTTTCTGGCACACTTATTGCTACATTGCCTGAGTCAATATGCAAATTATACAATCTCCAGACTTTGAAGTTGAGGAATTGTTATAAGCTAAAGATGCTTCCCAGCTGCATGCAAGATCTTGTGAATCTGCGCCACCTTGATATTCGAGGTGTTTCTCGTCTAAAAGAGATGCCGAAGAAAATGAGTAGGCTAAAGCATCTAAACTTCTTTAGTGATTATATGGTCGGCAAGGGTGATGAGAATGGAATAAGAGAACTGGAAACACTGGACAATTTGCATGGCTCATTTTGTATTTCCAAGTTGGAGAACATCAAGAATAGCCGTGAAGCTTCGGAGGCAAAGATGGGTAACAAGAAGCACATCAACAGTTTAAAATTGGAATGGAGTTCAGATGATGACATTGAAGATCCTCAGATTGAAACAGATATACTTGACGAGTTAGAACCTCATGAAAACTTGAAAGAGTTATCAATTTCGGGTTATCGAGGGGAAACATTCCCAGATTGGTTAGGCCTTTCTTGCTACTCCAATATGACCGAATTGAATCTGAAGCGTTGTAAGAATTGTTACGAGCTTCAGTCACTGGGACAACTACCCTCTCTTGAAATTCTGAAGATTATGTCTATGTGTTGCTGGCGAGAGTGGTATTGTCCTCAAGAGTTGGATGGTTTTCCTCGACTCAGAATCCTTGAAATAATAAACTGCCCGGCTTTAAGAGGAGATCTGCCTGCTTACCTTCCAGCTCTGGAGGAACTCACCATTGCTAATTGTGAAGAGCTTACATGTTCGTTGCCGAAGGCTCCCCAGCTTCAGCAATTATATGTAGTGGGTACACTGATGGGTAGTATGAGGTTATACTACCAGCACCCTCAAAATTATGCGCATGCGTTACAGTACAGCGTAATAATTTCAGAAACCCAGCTGGCGGAGTCCGTATTGGAGTGGCTACCCCGCATCCAACCCTCACGTCCAGCCATATCAACTTCAGTGCAACACAAGTCGCTAACCGAGATACTTGTACAGAGATGTGATTCGCTGATTTTATTTCCATTGGGGGACCTTCCAAATCTCAAGAGTCTCACAATCAGTAAATGCCAAAACATGGAATGTGTTGTGGTGTCTCGTGCTCTTCCAAGTTTACGTTATTTAAGCATCTCAGACTGCCTCAGTTTATTATCCTTGCCGGCGCTAGGGTTGGCTGCGCCCCACCTACAGGAGCTGTGCATATGCAATTGCCCAAAAGTCAGTTGTTTTGCTGAGGAGTCCCTCTCGCCTAGTTTGAAAAAACTTCAAGTCAAGCAATGCCAGAAACTAGAGAGGTGGATAACATCAAAGGGTTTGCAGAGTCAAGGCCTTACCCATCTTATCCTTGAGGAATGGAATGAGGTTAAGTCGTTCCCAACGGAGGCTTGCCTTCCTGCTTCTCTTCAGTCTCTAAAATTGTTCAACTTTTCAAATATGGAGACGCTTGACTGCAAGGGGCTCCACCATCTTACCTCCCTCAAAGATTTATATATTAGAAAATGTGAAAAGCTTGAGAATATCACAGAAGAAAATTTGCCTGCCTCCGTGTCAAATATCTACATTGGGGAAGAATGCCCTTTGAGCCGTAAGCTGGAACCGATGCAATACCCTTGGATTCAATTTAATCCTTACCAACAAATGGCATACCCATACACATACGCATACCCATCTACTCCTTACTACTGTACTACTAGTATTGAGGAAAATCCAAACGCATGTAGTGTGCAATGA 3540 0.404 MAAKLEGEAYLSSFVDAISKKLSSLLEHDSVLQGNDSDLKLLRVLDDCLCDIEPVLLDAELKQFRNERVKKWLVDLQDALYLADDFLDELSTKAATRTDQGESHDWSCAVDLIIDDCGVKAIEEIVGTLVYVVQQKGKLGLEKIAKLEISSWRIPSTSLVVSSDIFGRSKDKDNVIKLLLDDICDAESRVTVIPIVGMGGIGKTTLAQLVYNDANVMGKFDTRAWVCVAESPNPINVTKTIIGAIDSSPCNMDHFDSLQTNLKQKLSGKTFLVVLDDVWNDEQDTWEEFLKPFRYGNNGSKILLTTRSEKVASVFAANNLHYQLSLLSEEDCWSVFLKHSSISTDTREYATLEPIGRKIVEKCKGLPLALKTLGGLLRNKDNVGDWENILESEIWELSEDESKIVPALRVSYHYLPSHLKRCFVYCSLYPEDYQFDKGELILLWMAEDLLQSKKNNTLENIGGAYFDELVARSFFQRSSNNENLFVMHDLIHDLATFLAGKFYFKLQKIGNLHMIDNKARHLSFHAKCEDSIEIFREASNRAAHTRTMLNLQHYCESVDVKRNPELLGQHVRVLSFPIKSLPDSIGEWISLRYLNLSGTLIATLPESICKLYNLQTLKLRNCYKLKMLPSCMQDLVNLRHLDIRGVSRLKEMPKKMSRLKHLNFFSDYMVGKGDENGIRELETLDNLHGSFCISKLENIKNSREASEAKMGNKKHINSLKLEWSSDDDIEDPQIETDILDELEPHENLKELSISGYRGETFPDWLGLSCYSNMTELNLKRCKNCYELQSLGQLPSLEILKIMSMCCWREWYCPQELDGFPRLRILEIINCPALRGDLPAYLPALEELTIANCEELTCSLPKAPQLQQLYVVGTLMGSMRLYYQHPQNYAHALQYSVIISETQLAESVLEWLPRIQPSRPAISTSVQHKSLTEILVQRCDSLILFPLGDLPNLKSLTISKCQNMECVVVSRALPSLRYLSISDCLSLLSLPALGLAAPHLQELCICNCPKVSCFAEESLSPSLKKLQVKQCQKLERWITSKGLQSQGLTHLILEEWNEVKSFPTEACLPASLQSLKLFNFSNMETLDCKGLHHLTSLKDLYIRKCEKLENITEENLPASVSNIYIGEECPLSRKLEPMQYPWIQFNPYQQMAYPYTYAYPSTPYYCTTSIEENPNACSVQ 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151907g00001 1179 Gene3D - 326 410 IPR042197 -
Stsc151907g00001 1179 PANTHER DISEASE RESISTANCE PROTEIN RP 72 854 IPR044974 GO:0006952
Stsc151907g00001 1179 Gene3D - 411 497 IPR036388 -
Stsc151907g00001 1179 PRINTS Disease resistance protein signature 947 963 - -
Stsc151907g00001 1179 PRINTS Disease resistance protein signature 265 279 - -
Stsc151907g00001 1179 PRINTS Disease resistance protein signature 192 207 - -
Stsc151907g00001 1179 PRINTS Disease resistance protein signature 363 377 - -
Stsc151907g00001 1179 SUPERFAMILY L domain-like 486 869 - -
Stsc151907g00001 1179 FunFam Probable disease resistance protein At1g63360 412 497 - -
Stsc151907g00001 1179 Gene3D Ribonuclease Inhibitor 898 1017 IPR032675 -
Stsc151907g00001 1179 Gene3D Ribonuclease Inhibitor 1018 1123 IPR032675 -
Stsc151907g00001 1179 Gene3D Ribonuclease Inhibitor 539 884 IPR032675 -
Stsc151907g00001 1179 Pfam Rx N-terminal domain 14 101 IPR041118 -
Stsc151907g00001 1179 Gene3D - 15 117 - -
Stsc151907g00001 1179 SUPERFAMILY RNI-like 927 1113 - -
Stsc151907g00001 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 426 IPR027417 -
Stsc151907g00001 1179 Gene3D - 147 319 IPR027417 -
Stsc151907g00001 1179 Pfam NB-ARC domain 170 412 IPR002182 GO:0043531
Stsc151907g00001 1179 FunFam Probable disease resistance protein At1g61300 152 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151907g00001 Stsc-Chr151907 310 6540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151907g00001 190 664 WRKY Transcription Factor Family AT5G45050 23.897 1.18e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151907g00001 - - ahf:112708719 1467.6