Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151877g00003 ATGACAACAAATAATGATGCTGAAGGTGGATTAGAAATGATGGAGCAGTTTCTATGTGAAGTTGATGAGGAGTATATTCCGAAGGTTGGAATGACTTTTGAAACACTTGAGGAAGCTGGGTTGTTTTATAAAGAATATGCCAAACGTGCAGGATTCTCTACAAAAATAAGGAACACAAATAGAAGTAAGTGTACTAAGGAAGCAATTAATCAACTCATAACATGCAACAAAGAAGGGAAATGGACATCCGAAGTACCACGTGTTGAGAAGACGAACCCTATATGTGGTGAATGTCCAGCTCGAATTTTCGTTACGTAG 318 0.3805 MTTNNDAEGGLEMMEQFLCEVDEEYIPKVGMTFETLEEAGLFYKEYAKRAGFSTKIRNTNRSKCTKEAINQLITCNKEGKWTSEVPRVEKTNPICGECPARIFVT 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151877g00003 105 Pfam FAR1 DNA-binding domain 42 87 IPR004330 -
Stsc151877g00003 105 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151877g00003 Stsc-Chr151877 15569 15993 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151877g00003 FAR1 4.6e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151877g00003 - K17604 adu:110280446 108.227