Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151875g00004 ATGGGTGAGTTTGAGGAGAAGGTTGTGTCATTGTATAGAAGCAAATGGCTTGTGTTTGTGGGTGCAATGTGGTTGCAATCATGTGGGGGAGTAGGGTACTTGTATGGGAGCATATCACCGGTGATAAAAGAGTCCCTTAATTATAACCAGAAGCAACTTTCTATGGTTGGTGTGGCCAAAGATCTTGGTGACTCTGTTGGCTTTGTCACTGGTATTCTCTGTGAGATTTTGCCTATTTGGGGTGCTCTTCTTGTTGGTGCTCTCCTCAACCTTGTTGGCTATGGATGGATTTGTGCTCTAATATTCATCGGAACAAATGGCGAAACCTACTTCAACACAGTTTCTCTGGTGTCATGCGTACAAAACTTCCCGAAAAGCCGAGGTCCCGTGGTTGGAATCCTAAAGGGCTTTGCAGGACTTAGTGGTGCAATATTGACACAAACATATGCACTGATCCATTCCCCTGATCATGCATCATTGATATTCATGGTCGCCGTCGGTCCGGCAATGGTCGGAGTAGGCCTAATGTTCATCGTCCGACCGATCGGAGGGCGCAAACAAGTCCGTCCATCTCCATCAGACGACAAGAACTTCACATTCATATATGGAGTTTGCCTCCTTCTAGCTGCTTACCTAATGGGGGTCATGGTTGTCCAAGATCTAGTTTCTGTCAGTAACACCATGGTAACTGTTTTCACAATCATCCTTTTCTTGATCCTCCTTGTCCCAGTTGCCATTCCTGTTTCGCTAGCTTTCGGCACGAATCAAAAGGCTCCAGAGGAGGAGGCAGTTCTTCTTCCTGTAGCACAGAGTAGTAAGCCAATACAAGATTATGAGGAGGGACTACTGAGTGAGGTGGAAGAGGAAAAGCCCAAGGAAGTGGACTCGCTTCCGGCACAAGAAAGGCGAAAGTGTATAGTGCAGTTGCAATTGAAGATGGTTCAAGCAGCAGCAAAAGGAGCTGTGAGAGTTAAGAGGAGGAGAGGGCCACACAGGGGAGAGGATTTTACTCTGAGACAAGCTTTGATTAAAGCAGATTTTTGGCTTCTCTTCATTTCCATGATCATGGGCTCTGGATCTGGCTTAACGGTGATTGACAATTTGGGTCAGATGAGCCAGTCTCTTGGATATGGCAATGCGCATATTTTTGTTTCCTTGGTCAGTATTTGGAACTTCCTTGGCCGTGTTGGAGGTGGTTACATATCAGAGATTGTTGTGAGGGATCATGCATATCCAAGACCAGCAGCTCTCGCAGTGTTTCAAGTGATTATGACTTTTGGGCATCTCTTCATTGGCATGGGATGGCCAGGGTCCATGTATTTCAGCACTCTACTCATTGGACTTGGCTATGGAGCTCATTGGGCAATTGTTCCAGCTACTGCCTCTGAATTATTCGGTTTGAGAAACTTTGGTGCCTTGTACAACTTTATCACTCTCTCAAACCCCATGGGAACTCTTGTCTTCTCCAGTCTCATTGCAAGCAGAATCTATGATCATGAAGCAGAGAAACAAGCAAAAACCGACCCACTAGAGTGTAATGGTTCCATATGCTTTTTCCTCACTTCTGTCATCATGGCTGGATTATGTATCGTTGGGGCACTCTTGTGCATGATTCTAGTGTTCCGAACAAAGATTGTTTATGCCAACTTATATGGAAAATCTTCCCGCCATAACCTTCGATAA 1683 0.4551 MGEFEEKVVSLYRSKWLVFVGAMWLQSCGGVGYLYGSISPVIKESLNYNQKQLSMVGVAKDLGDSVGFVTGILCEILPIWGALLVGALLNLVGYGWICALIFIGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQTYALIHSPDHASLIFMVAVGPAMVGVGLMFIVRPIGGRKQVRPSPSDDKNFTFIYGVCLLLAAYLMGVMVVQDLVSVSNTMVTVFTIILFLILLVPVAIPVSLAFGTNQKAPEEEAVLLPVAQSSKPIQDYEEGLLSEVEEEKPKEVDSLPAQERRKCIVQLQLKMVQAAAKGAVRVKRRRGPHRGEDFTLRQALIKADFWLLFISMIMGSGSGLTVIDNLGQMSQSLGYGNAHIFVSLVSIWNFLGRVGGGYISEIVVRDHAYPRPAALAVFQVIMTFGHLFIGMGWPGSMYFSTLLIGLGYGAHWAIVPATASELFGLRNFGALYNFITLSNPMGTLVFSSLIASRIYDHEAEKQAKTDPLECNGSICFFLTSVIMAGLCIVGALLCMILVFRTKIVYANLYGKSSRHNLR 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151875g00004 560 SUPERFAMILY MFS general substrate transporter 15 544 IPR036259 -
Stsc151875g00004 560 CDD MFS_Mch1p_like 14 533 - -
Stsc151875g00004 560 Gene3D MFS general substrate transporter like domains 197 544 IPR036259 -
Stsc151875g00004 560 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Stsc151875g00004 560 Pfam Nodulin-like 15 248 IPR010658 -
Stsc151875g00004 560 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151875g00004 Stsc-Chr151875 15405 17985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151875g00004 5 554 Nodulin-like Gene Family AT5G14120 66.028 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151875g00004 - - adu:107473816 877.085