Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151873g00006 ATGGAGACAATGTCATATCTGTCGCTTCTTTCTGCTGATGCTTCTAGCAAGTTAAGAGCCACTTGTAAAAAGGGTAAGGTGTTGATGGTTCTAACAAATGCACTGGGCTTGTTGAAACCAGTTATTATCCTGATTATTGTTAACTTAGCTATGGCTGTTGTCAATTTACTCATGAAGAAGGTTCTTAATGAAGGAATGGACAACATGATCATTGTAACATATCGACAAGTAGTTTCGTTTACCTTCTTGGCACCTATTGCTTGCTTGTACGAAAGGAAACACAAATTGGAGGCTCACATAATATGTCTCCTTTTTCTCAGTGCCCTTGTCGGAGTAACACTCACCCAATACATATTTCTTCTTGGCCTTGAATATACGTCTACCACGTTTTCATGTGCATTCCTCAATGCAGTGCCAGTATTCACCTTCATCGTGGCACTGCCATTTGGGTAA 453 0.4018 METMSYLSLLSADASSKLRATCKKGKVLMVLTNALGLLKPVIILIIVNLAMAVVNLLMKKVLNEGMDNMIIVTYRQVVSFTFLAPIACLYERKHKLEAHIICLLFLSALVGVTLTQYIFLLGLEYTSTTFSCAFLNAVPVFTFIVALPFG 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151873g00006 150 Pfam EamA-like transporter family 39 146 IPR000620 GO:0016020
Stsc151873g00006 150 PANTHER WAT1-RELATED PROTEIN 40 147 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151873g00006 Stsc-Chr151873 24306 25711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151873g00006 37 149 Nodulin-like Gene Family AT3G30340 48.696 3.53e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151873g00006 - - gmx:100802053 191.43