Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151862g00004 ATGGTTTACACCAACCGATTCCTTCCTCACCAAGCATTGATCCAAAATGGCAGCACCTTCGCCGACCGCCCTGTTGCTGTTCCTACCAAGAAAATCATTAGCAGCAATCAACATGACATCCTTTTTAGCTTCTACGGTCCTGTATGGCGTGCCCTCCAGCGAAATCTCACCTCAAAGATCCTTCACCCTTCACAGGTCAAGTCTTATGCAAATGCGCGCAAATGGGTGTTAGATATGCTTTTTGATCGGTTAAAATATGAATTGGGGGCAAGCAACCCCATAAGGCTTGATGAGAAACAAATAAGGGAAATTGAGGATAGTTTACGCGGCATGCTCTTGAGCTTTACTAGGTACAATGTCTTGAATTTTTGGCCACCAATCACAAGGATATTGTTTTGGAAGAGATGGAAGGAATTCTTACAGCTAAGGAAAGACCTAGAAGCCGTGTTGGTTCCTTATATCGATGCTCGAAAGAAAGTCACGCAAGACAGACTTAGCAAGGATGGTGAAGAGGACAGTAACACAAACGAGTTTGTCTTGTGCTATGTGAATACTTTGTTGGATTTGCGACTGGTGGACGATGATGAAGGGAGCAAGCTTGATTATGGTAATATTTGCACCTTATGCTCAGAGTTTCTAAACACCGGAACAGATACTACTTCGACAGCATTGGAATGGATCATGGCAAATTTGGTGAAGTACCCTCAAATCCAAGAAAGGCTTTTAGAGGAAATCAGAGAGGCCATGGTTGATGGAGAGGAGAAGGTGAAGGAGGAAGATTTTCAAAAGTTGCCATATCTAAAAGCTTTGATCTTGGAGGGTCTAAGGCGCCATCCGCCACTACACTATGTGGCTCCTCATAGAGTAACCAAGGATGTAGTTCTGGATGGTTATTTGGTTCCTACCACTACCTCTGTAAATTTCTTTGTGGCTGAGATAGGAAGGGACTCTACAGCTTGGGATGACCCTCTGGCCTTCAAGCCAGAGAGATTCATGGACAATGGAGGAACAACTTTTGATATAATGGGAAGTAAAGAGATAAAGATGATGCCATTTGGGGCAGGGAGGAGAATGTGCCCTGGATATGGTTTAGCAATTCTCCACTTGGAGTATTTTGTGGCCAATCTTGTTTAG 1134 0.4383 MVYTNRFLPHQALIQNGSTFADRPVAVPTKKIISSNQHDILFSFYGPVWRALQRNLTSKILHPSQVKSYANARKWVLDMLFDRLKYELGASNPIRLDEKQIREIEDSLRGMLLSFTRYNVLNFWPPITRILFWKRWKEFLQLRKDLEAVLVPYIDARKKVTQDRLSKDGEEDSNTNEFVLCYVNTLLDLRLVDDDEGSKLDYGNICTLCSEFLNTGTDTTSTALEWIMANLVKYPQIQERLLEEIREAMVDGEEKVKEEDFQKLPYLKALILEGLRRHPPLHYVAPHRVTKDVVLDGYLVPTTTSVNFFVAEIGRDSTAWDDPLAFKPERFMDNGGTTFDIMGSKEIKMMPFGAGRRMCPGYGLAILHLEYFVANLV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151862g00004 377 Pfam Cytochrome P450 96 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 CDD CYP77_89 1 377 - -
Stsc151862g00004 377 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 352 361 IPR017972 GO:0005506|GO:0016705
Stsc151862g00004 377 PRINTS E-class P450 group I signature 224 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 PRINTS E-class P450 group I signature 268 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 PRINTS E-class P450 group I signature 8 29 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 PRINTS E-class P450 group I signature 204 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 PRINTS E-class P450 group I signature 309 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 PRINTS E-class P450 group I signature 349 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 PRINTS P450 superfamily signature 350 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 PRINTS P450 superfamily signature 215 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 PRINTS P450 superfamily signature 269 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 SUPERFAMILY Cytochrome P450 8 377 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151862g00004 377 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 377 - -
Stsc151862g00004 377 Gene3D Cytochrome P450 2 377 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151862g00004 Stsc-Chr151862 15155 16351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151862g00004 4 377 Cytochrome P450 AT1G64940 53.165 5.70e-150 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151862g00004 K24184 - gmx:100816275 566.229