Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151855g00001 ATGGCGGACCAGAAGAACCGATGGAGCTGGGACGTCACCGGCTTCGAGCCGCGGAAGCCGCAGTCGCCGGAAGGAGGCGATCAGACGCTAAATGCATCGACGGCAAGGTGGCAGTCCATCTCCTCCTCTATGCCTCCGCCGCAATCCGTGGCTTCCAAGGTTCAGCGATTGAAGGACAATGTTAAGGTGCATGACGATATTCTTCTTTGTTTGTGTCTTCATAGCTGCTCACGTTTTGTTTCTGTGTTCGGAGGGTACTTTGCACAGCTTGCTAGAAAAGACTACTTGCAGTTAAGACAAGAAGCAACTGAACTTCAGGAATATGCAAATGCAAAACTTGATCGAGTTACACGATATCTTGGTGTTCTTGCTAAGAAATCCCGCAAGTTAGATCAAGCTGCCCTTGAAACTGAGGCAAGAATATCTCCAATGATCTATCAGAAAAAGAGATTGTTCAATGACTTATTGACATCTAAAGGAAACATACGTGTTTGCTGCCGTACAAGACCATTATTTGAAGATGAAGGTCCTTCAGTCATTGAATTTCCCAATGATTTTACTATCCGTGTAAATACTGGTGATGAATCCTTGTCCAACATCAAGAAAGATTTTGAATTTGACAGAGTTTACGGTCCTCATGTTGGACAGGCTGAGTTGTTCACTGATGTTCAGCCACTAGTGCAATCAGCATTGGATGGATATAATGTTTCAATATTTGCATATGGACAAACCAATTCTGGAAAGACGCACACTATGGAAGGGCCAGACTATGATCGAGGTCTATATGCTTGTTGTTTTGAGGAGTTGTTTGATTTAGCCAACTCAGATTTGACTGCCACTTCTCAGTACAAATTCTGCATCACTGTTTTTGAGCTCTATAATGAACAGACTAGAGATCTTATCTTGATGTCTGGCAAAAGCATGCCTAAACTCTCTTTTGGATTGCCTGAATGTTCCATAGAACTAGTGCAGGAAAAAGTCGACAACCCTCTGGAGTTTGTTAGGGTTTTGAAAGCTGCATTTCAGAACCGAGGAAATGATACGTTAAAGCTTAATGTTTCTCATTTGATTGTCACAATACACATATTTTATAACAATTTGATCACCGGTGAAAACTCATATAGCAAACTCTCTCTTGCTGATTTGGCTGGAAGTGAAGGTTTAATAACTGAAGATGATAGTGGTGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCACTTTCAGCTGTGGGAGATGTTTTGTCTTCTTTGACCTCAAAGAAGGATGCTATTCCTTATGAGAACTCAGTGCTAACAAAACTGCTTGCAGACTCGATCGGTGGGAGTTCAAAAACACTGATGATTGTGAACTTGTGTCCAAATATTTCAAATTTATCTGAGACATTATCCTCTGTCAATTTCTCTTCCAGAGCAAGAAATTCTGTATTAAGCCTTGGAAACCGAGATATGATTAAGAAGTGGAGAGATGTTGCGAATGATTCACGAAAGGAATTGTATAAGAGAGAAAAAGAACTTCAAGATCTGAAGCAAGAGGTTCTGGGTCTTAAGCAACTGCTTAAAGATGCAAATGATCAGTGTGTTCTACTCTTCAATGAAGTGCAGAAGGCATGGAAAGTTACTTCTGCATTGCAGACAGATCTAAAGGCAGAGCATATTATTCTGGAAGATAATCATAATATAGAGAAAGAACAAAGTGATCAGCTTAGAAATCAAGTTGCTCAACTGTTACAGTTAAAGCAAGAACAAAACTTGAAGATACAACAGCAGGATTCAACCATCGAAACTTTGCAGGCTAAAATTGGAACCCTTGATGCACAATTCAATGAAGCTCTTAGATCCAGCAGCACTGGGTCAAATGGCATGGATTCTTCTACTGTAAACATGAAACTGGAAGCGGAACTCAAGAAACGTGATGCTCTAATTGAGAGGTTGCACCAAGAAAATGAGAAATTATTTGATAAATTAACAGAGAAAATGTCTTTGTCTGGATCTCCTCAGTTTTCAAGTACATCATCTAGGGGATCAGTTAATGTTCAGCCCCAAAATATTGGGAGCAACAATATAAGGTATCGTCCAATGGATGTTCTTCCTTCACCCTTGGTGACAGATAAAAATGGTGGCTCATTTGCTCTAGTTAGATCTGGTTCTGACAAAGATAAGACTACCCCGGCCGGTGAATATCTTAATGCTGCCCTGATTGACTTTAACCCAGATAAATACGATGGCCATGCTGCCATTGCTGATGGTGCAAACAAGCTTCTGATGCTGGTTCTAGCTGCAGTCATTAAAGCTGGTTCCTCCAGAGAACATGAGATGCTTGCTGAAATTAGGGATGCTGTTTTCTCTTTTATTCAGAAAATGGAGCCAAAGCGAGTAATGGATACCATGCTTGTTTCCCGTGTTAGAATCCTGTATATACGATCTTTGATTGCTAGATCTCCAGAGTTGCAATCCATTAAGGTCTTGCCAATTGAGTGCTTTCTAGAAAAGGCTAATGCTGGACGCAGTAGAAGTTCCAGCAGAGGGAGTAGTCCTGGAAGATCTCCTGTGCAATATTTCGATGAGCAGATCCAAGGATTTAAAGTGAATATAAAGCCTGAAAAGAAGTCCAAATTTTCATCTGTTGTTTTGAAGATACGTGGAATTGATGAGGACACCTGGAGACAGCAGGTAACTGGTGGAAAGCTAAGGGAAATTACTGAAGAAGCCAAAAGTTTTGCTGTTGGAAACAAGCCTCTTGCTGCACTCTTTGTACATACTCCTGCAGGTGAGCTGCATCGTCAAATTAGAATATGGCTTGCTGAGAGCTTCGATTTTCTATCTCTTACTGCAAATGATGCAACGGGGGGAACAACTGGCCAGTTGGATCTTATTTCAACTGCAATTATGGATGGTTGGATGGCTGGACTGGGGGCTGCTCAGCCTTCCAACACTGATGCGCTTGGCCAACTGCTACTTGAATATTCAAAACGCGTCTATACTTCCCAACTGCAGCACTTGAAGGATATTGCTGGTACCCTGGGAACAGAAGAGGCCGACAATACAGCACAGGTGGCCAAGTTGCGTTCAGCTCTAGAATCTGTTGATCTCAAAAAACGAAGGATGTTGCATCAAATGAGAAGCGATGTAGCTTTATTTACACTGGAAAGTGATGGTTCACCTGTGCAAAGTCCTTCTACTGCTGCAGAAGATTCACGATTGGCATCTCTCATTTCACTTGATAGCATATTGAAGCAAATAAAGGATATAACAAGACTTTCTAATATGAATACCATCCGGAGATGTAAAAAGAGAGCAGCGCTAGATTCTCTTGATGAACTGACTCAAAGGATGCCTTCACTTCTTGAAATTGACCATCCATGTGCTCAGAGGCACATTGCAGATGCTCGCCGCCTGATTGAGTCAATTCCTGAAGAAGATGACAACAGCCAAGGCAAGCCGATCACAGACCTGGGTTCTGGCTCTGGAACTGATGTGGCACAGTGGAACGTCCTCCAGTTTAATACTGGCACTACCTCACCATTTATCATTAAATTTGGAGCAAACTCAAATTCAGAACTAATAATCAAAGCCGATGCTCGAATACAGGAGCCTAAAGGAGGTGAGATCGTGAGGGTCGCACCTAAACCTTCCGTGTTGGAAGATATGAACTTGGAGCAACTGAACCAGGTATTTGCCGAACTACCTGAGGCTCTAAGCTTGCTTGCCTTGACAAGGACGGCAGATGGCACTCGAGCACGGTATTCTAGATTATATAGGACTTTAGCCATGAAGGTTCCATCCCTTAGGGACCTGGTCAGTGAGCTTGAGAAAGGGGGTGCACTGAAAGATGTTAAGACATAA 3846 0.4223 MADQKNRWSWDVTGFEPRKPQSPEGGDQTLNASTARWQSISSSMPPPQSVASKVQRLKDNVKVHDDILLCLCLHSCSRFVSVFGGYFAQLARKDYLQLRQEATELQEYANAKLDRVTRYLGVLAKKSRKLDQAALETEARISPMIYQKKRLFNDLLTSKGNIRVCCRTRPLFEDEGPSVIEFPNDFTIRVNTGDESLSNIKKDFEFDRVYGPHVGQAELFTDVQPLVQSALDGYNVSIFAYGQTNSGKTHTMEGPDYDRGLYACCFEELFDLANSDLTATSQYKFCITVFELYNEQTRDLILMSGKSMPKLSFGLPECSIELVQEKVDNPLEFVRVLKAAFQNRGNDTLKLNVSHLIVTIHIFYNNLITGENSYSKLSLADLAGSEGLITEDDSGERVTDLLHVMKSLSAVGDVLSSLTSKKDAIPYENSVLTKLLADSIGGSSKTLMIVNLCPNISNLSETLSSVNFSSRARNSVLSLGNRDMIKKWRDVANDSRKELYKREKELQDLKQEVLGLKQLLKDANDQCVLLFNEVQKAWKVTSALQTDLKAEHIILEDNHNIEKEQSDQLRNQVAQLLQLKQEQNLKIQQQDSTIETLQAKIGTLDAQFNEALRSSSTGSNGMDSSTVNMKLEAELKKRDALIERLHQENEKLFDKLTEKMSLSGSPQFSSTSSRGSVNVQPQNIGSNNIRYRPMDVLPSPLVTDKNGGSFALVRSGSDKDKTTPAGEYLNAALIDFNPDKYDGHAAIADGANKLLMLVLAAVIKAGSSREHEMLAEIRDAVFSFIQKMEPKRVMDTMLVSRVRILYIRSLIARSPELQSIKVLPIECFLEKANAGRSRSSSRGSSPGRSPVQYFDEQIQGFKVNIKPEKKSKFSSVVLKIRGIDEDTWRQQVTGGKLREITEEAKSFAVGNKPLAALFVHTPAGELHRQIRIWLAESFDFLSLTANDATGGTTGQLDLISTAIMDGWMAGLGAAQPSNTDALGQLLLEYSKRVYTSQLQHLKDIAGTLGTEEADNTAQVAKLRSALESVDLKKRRMLHQMRSDVALFTLESDGSPVQSPSTAAEDSRLASLISLDSILKQIKDITRLSNMNTIRRCKKRAALDSLDELTQRMPSLLEIDHPCAQRHIADARRLIESIPEEDDNSQGKPITDLGSGSGTDVAQWNVLQFNTGTTSPFIIKFGANSNSELIIKADARIQEPKGGEIVRVAPKPSVLEDMNLEQLNQVFAELPEALSLLALTRTADGTRARYSRLYRTLAMKVPSLRDLVSELEKGGALKDVKT 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151855g00001 1281 Gene3D Kinesin motor domain 106 475 IPR036961 -
Stsc151855g00001 1281 MobiDBLite consensus disorder prediction 1 32 - -
Stsc151855g00001 1281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 513 IPR027417 -
Stsc151855g00001 1281 Coils Coil 559 600 - -
Stsc151855g00001 1281 ProSiteProfiles Kinesin motor domain profile. 161 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151855g00001 1281 PRINTS Kinesin heavy chain signature 376 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151855g00001 1281 PRINTS Kinesin heavy chain signature 425 446 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151855g00001 1281 PRINTS Kinesin heavy chain signature 233 254 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151855g00001 1281 MobiDBLite consensus disorder prediction 1136 1155 - -
Stsc151855g00001 1281 Coils Coil 492 526 - -
Stsc151855g00001 1281 PANTHER KINESIN-LIKE PROTEIN KLP-3 92 649 IPR027640 GO:0003777|GO:0007018
Stsc151855g00001 1281 MobiDBLite consensus disorder prediction 663 685 - -
Stsc151855g00001 1281 Pfam Kinesin motor domain 168 474 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151855g00001 1281 Coils Coil 628 651 - -
Stsc151855g00001 1281 SMART kinesin_4 159 483 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151855g00001 1281 FunFam kinesin-like protein KIN-14B isoform X1 108 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151855g00001 Stsc-Chr151855 1478 16174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151855g00001 148 476 Calmodulin-binding Proteins AT5G65930 36.152 1.40e-48 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151855g00001 - - gmx:100810330 1906.72