Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151845g00001 ATGGTTGGCGACGGTAACGGTGACCGCAACACCGGTCGTGATAGGAGCAGCAACGGAGGTCGGCGAAAAGAGCAGCGGTGTGGATCCGAGATGAATTTGATTTTCTGTGATGTTGTTGAGGAGTATATTCCAAAGGCTGGAGTGACTTTTCCAACAGTTGAAGAAGCTGCTGCTTTCTATAAAGAGTATGCTAAACGTGCTGGGTTTTCTACTAAAATAAGAAACACCAATAGGTGTAAGGAGACCAAGGAAATAAATAATCAACTCATCACATCTAATAGAGAGGGGAAATGGACATCTGAAGTACCGTATGTTGAGAAGACGAATCCAATGTGTGGTGCAAATTGTCCTGCACGAATTTATGTGCATGTATTTGGTGTATTTCAAAGGTTGTTCTTCATCATTCACATCCATGTTGTCCTGATCAAGCTCAAATGTTGGCACAACATAGGGAGCTCAGCATGCAAGTTCGTCGTACTATTGAAAATAACGATCAATCTGGTATTAGACCAAATCAAACCTATCAATCGTTTGTGA 537 0.419 MVGDGNGDRNTGRDRSSNGGRRKEQRCGSEMNLIFCDVVEEYIPKAGVTFPTVEEAAAFYKEYAKRAGFSTKIRNTNRCKETKEINNQLITSNREGKWTSEVPYVEKTNPMCGANCPARIYVHVFGVFQRLFFIIHIHVVLIKLKCWHNIGSSACKFVVLLKITINLVLDQIKPINRL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151845g00001 178 MobiDBLite consensus disorder prediction 8 25 - -
Stsc151845g00001 178 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 123 - -
Stsc151845g00001 178 MobiDBLite consensus disorder prediction 1 25 - -
Stsc151845g00001 178 Pfam FAR1 DNA-binding domain 59 123 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151845g00001 Stsc-Chr151845 6645 8049 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151845g00001 FAR1 3e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151845g00001 - - aip:110271906 112.079