Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151837g00004 ATGGTTTCGATATCAACATGGGCTCGATATGTTGCTCACAAGCTCGAATACTCCTTTTCTGTTGGCTACAAGAACTATAAAGGAGGTAATATTACAGATAGAGAGCTCGGTGATTTTCTTTTGAAGAACTTCTTCCATGGAAAGTTGACATACACTCAGTGGATTAAAGGAGACGCAATGGCCCCTACTATTGCTGAAAAACCAGCGTTACTTCTTGTTCGGAAATTACCGGATCCTGAACCAACGCGTGTTTTTGTAGGAGATGTTGTGGTCTTGAAGGACCCCCAGAAACCAGATAACTACCTAGTTAGAAGATTACTGGCAGTTGAAGGTTATGAAATGGTTTCTACTGATGAAAAAGACGAGCCCTTTGTTCTTGACAAGGATCAGTGCTGGGTAAAAGCTGACAATGAAAAGTTGAAAGCAAAGCAGGAAGCAAACGATAGTCGAACATTTGGTCCAGTTCAAATGACAGACATTGTAGGCAGAGTCATATATTGCCTGCGAAGCGCAGTGGACCATGGCCGTGTTCAGAACAGTCGGTCCAGCATGCAACAGGATTTGCCCGTGTTGGAAGTGGAGCTCGATGTTGACGAGATGGCAAAGATTCACAAAGCCTAG 621 0.438 MVSISTWARYVAHKLEYSFSVGYKNYKGGNITDRELGDFLLKNFFHGKLTYTQWIKGDAMAPTIAEKPALLLVRKLPDPEPTRVFVGDVVVLKDPQKPDNYLVRRLLAVEGYEMVSTDEKDEPFVLDKDQCWVKADNEKLKAKQEANDSRTFGPVQMTDIVGRVIYCLRSAVDHGRVQNSRSSMQQDLPVLEVELDVDEMAKIHKA 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151837g00004 206 Gene3D Umud Fragment, subunit A 49 185 - -
Stsc151837g00004 206 PANTHER OSJNBA0068L06.9 PROTEIN 1 205 - -
Stsc151837g00004 206 CDD S26_SPase_I 55 164 IPR019533 GO:0004252|GO:0006465
Stsc151837g00004 206 SUPERFAMILY LexA/Signal peptidase 51 177 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151837g00004 Stsc-Chr151837 15012 19155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151837g00004 60 175 MADS-box Gene Family AT1G29960 27.642 6.74e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151837g00004 - - ahf:112738901 356.295