Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151809g00003 ATGCAGGCATTTTTTGGAATTTTTGATGGGCACGGAGGTGCAAAGGCTGCTGAATTTGTGGCAGATAACTTAGAAAAGAATGTGTTAGATGAAGTGATCCTTAGCGAAGAAGAAGATAGCGTTGAGGAGGCTGTGAAGCGCGGTTATCTCAAGACCGATTCTGCTTTCTTGAAAGGTGATCTCCATGGCGGATCTTGCTGTGTCACCGCCTTGATTAGGAACGGTAACCTTGCCGTGTCCAATGCCGGCGATTGCCGAGCTGTTATAAGCAGGGGAGGTGTTGCTGAGGCCCTCACTTCCGACCACCGGCCTTCAAGGGAAGACGAAAGGGACAGAATTGAGACTCAGGGTGGCTATGTTGATCTGTGCCGCGGAGTCTGGAGGATCCAGGGATCCCTTGCTGTGTCGAGGGGAATCGGCGATAGGCACCTAAAACAATGGGTGATTGCCGAACCCGAGACCAAAGTTATCAGAATCGAACCCGAACATGACTTGTTAATCTTAGCTTCAGATGGATTATGGGATAAGGTTAGTAACCAAGAAGCAGTAGACATTGCTCGACCTCTTTGCGTAGGTAGCAGCAAGGCACAGCCATTGCTGGCGTGTAAAAAGCTTGTAGATTTGTCCGTTTCGCGCGGCTCCCTGGATGATACAAGTGTTATGCTGATCAAACTTGACCGCTACGCATGA 690 0.4957 MQAFFGIFDGHGGAKAAEFVADNLEKNVLDEVILSEEEDSVEEAVKRGYLKTDSAFLKGDLHGGSCCVTALIRNGNLAVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIETQGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVIAEPETKVIRIEPEHDLLILASDGLWDKVSNQEAVDIARPLCVGSSKAQPLLACKKLVDLSVSRGSLDDTSVMLIKLDRYA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151809g00003 229 SMART PP2C_4 3 223 IPR001932 -
Stsc151809g00003 229 SUPERFAMILY PP2C-like 3 226 IPR036457 -
Stsc151809g00003 229 ProSiteProfiles PPM-type phosphatase domain profile. 1 225 IPR001932 -
Stsc151809g00003 229 FunFam probable protein phosphatase 2C 25 1 228 - -
Stsc151809g00003 229 PANTHER PROTEIN PHOSPHATASE 2C 3 223 IPR015655 GO:0004722|GO:0006470
Stsc151809g00003 229 ProSitePatterns PPM-type phosphatase domain signature. 4 12 IPR000222 GO:0043169
Stsc151809g00003 229 CDD PP2Cc 2 225 IPR001932 -
Stsc151809g00003 229 Gene3D - 1 229 IPR036457 -
Stsc151809g00003 229 Pfam Protein phosphatase 2C 3 217 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151809g00003 Stsc-Chr151809 16683 18323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151809g00003 2 225 PP2C-type Phosphatase Gene Family AT1G07160 72.566 2.36e-117 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151809g00003 K17506 - gmx:100797934 397.897