Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151809g00002 ATGTCTTGCTCCGTCGCAGTTTCCAATTCTCCGGTGTTCTCTCCTCCCTCCTCTCTATTCTACTCAAAGCCTTCCATCATTACTTCCATCTCTGCTGCTGCCGCTGCTGCTGCTACGGCGTCGTCTTGCTCCTCACCCGCTTCTTCTTCTTCTCCTTCTCCCTCTTCTCCTTCTCCTTCTTCGCCGTTGCGTCTTCGTCTTCCCAAGGCGCCAACCGCGTTAACGAACCCTAATGCTATTCCTGCTTCTCTTTCGGGTGTTGTTGCGGTTTCTTCTTCTGCTGCTGCCACGTCGCCAAACGGCGCCGTTTTGAAGAGGAAGAGGCCTGCTAGGCTTGATATACCTGTTAGCTCTGTGGCCTTTGGGATTCCTCCCACGCCGTCTGCTGCGCCGGCGCGTGATGTTGTGGAGGAGGAGCGTGATGGCTTCTCTGTTTATTGTAAGAGAGGGAGAAGGGAGTACATGGAAGATCGCTATTCCGCTGGCGATAACCTACGCGGAGAACAAAAACTGGCATTTTTTGGAATTTTTGATGGGCACGGAGGTGCAAAGGCTGCTGAATTTGTGGCAGATAACTTAGAAAAGAATGTGTTAGATGAAGTGATCCTTAGCGAAGAAGAAGATAGCGTTGAGGAGGCTGTGAAGCGCGGTTATCTCAAGACCGATTCTGCTTTCTTGAAAGGTGATCTCCATGGCGGATCTTGCTGTGTCACCGCCTTGATTAGGAACGGTAACCTTGCCGTGTCCAATGCCGGCGATTGCCGAGCTGTTATAAGCAGGGGAGGTGTTGCTGAGGCCCTCACTTCCGACCACCGGCCTTCAAGGGAAGACGAAAGGGACAGAATTGAGACTCAGGGTGGCTATGTTGATCTGTGCCGCGGAGTCTGGAGGATCCAGGGATCCCTTGCTGTGTCGAGGGGAATCGGCGATAGGCACCTAAAACAATGGGTGATTGCCGAACCCGAGACCAAAGTTATCAGAATCGAACCCGAACATGACTTGTTAATCTTAGCTTCAGATGGATTATGGGATAAGGTTAGTAACCAAGAAGCAGTAGACATTGCTCGACCTCTTTGCGTAGGTAGCAGCAAGGCACAGCCATTGCTGGCGTGTAAAAAGCTTGTAGATTTGTCCGTTTCGCGCGGCTCCCTGGATGATACAAGTGTTATGCTGATCAAACTTGACCGCTACGCATGA 1197 0.5146 MSCSVAVSNSPVFSPPSSLFYSKPSIITSISAAAAAAATASSCSSPASSSSPSPSSPSPSSPLRLRLPKAPTALTNPNAIPASLSGVVAVSSSAAATSPNGAVLKRKRPARLDIPVSSVAFGIPPTPSAAPARDVVEEERDGFSVYCKRGRREYMEDRYSAGDNLRGEQKLAFFGIFDGHGGAKAAEFVADNLEKNVLDEVILSEEEDSVEEAVKRGYLKTDSAFLKGDLHGGSCCVTALIRNGNLAVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIETQGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVIAEPETKVIRIEPEHDLLILASDGLWDKVSNQEAVDIARPLCVGSSKAQPLLACKKLVDLSVSRGSLDDTSVMLIKLDRYA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151809g00002 398 PANTHER PROTEIN PHOSPHATASE 2C 78 392 IPR015655 GO:0004722|GO:0006470
Stsc151809g00002 398 ProSiteProfiles PPM-type phosphatase domain profile. 142 394 IPR001932 -
Stsc151809g00002 398 ProSitePatterns PPM-type phosphatase domain signature. 173 181 IPR000222 GO:0043169
Stsc151809g00002 398 FunFam probable protein phosphatase 2C 25 135 397 - -
Stsc151809g00002 398 Pfam Protein phosphatase 2C 143 386 IPR001932 -
Stsc151809g00002 398 SUPERFAMILY PP2C-like 142 395 IPR036457 -
Stsc151809g00002 398 SMART PP2C_4 135 392 IPR001932 -
Stsc151809g00002 398 SMART PP2C_SIG_2 140 394 IPR001932 -
Stsc151809g00002 398 CDD PP2Cc 142 394 IPR001932 -
Stsc151809g00002 398 Gene3D - 133 398 IPR036457 -
Stsc151809g00002 398 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151809g00002 Stsc-Chr151809 16683 19052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151809g00002 1 397 PP2C-type Phosphatase Gene Family AT2G30020 62.129 9.85e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151809g00002 K17506 - gmx:100797934 552.362