Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151798g00006 ATGGATGGCATGAATTACACGTTGATTTCTGAGTCATCGTATGAATCAGAATCGATTATGCAGCAGTTTCCACATGACGTTGATGATGAGTATACTCCGAAGGCTGGAATGACTTTCCCAACACTTGAAGAAGCTGCTGCTTTCTATAAGGGGTATGCTAAACGTGCAGGGTTTTCCACCAAAATAAGGAACACCAATAGGTGTAAGGAGACAAAGGAAGTTAAGAATCAACTAATCACATGTAATAAAGAGGGGAAATGGGTGTCTACCTTACGTTGA 279 0.4086 MDGMNYTLISESSYESESIMQQFPHDVDDEYTPKAGMTFPTLEEAAAFYKGYAKRAGFSTKIRNTNRCKETKEVKNQLITCNKEGKWVSTLR 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151798g00006 92 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 85 - -
Stsc151798g00006 92 Pfam FAR1 DNA-binding domain 48 86 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151798g00006 Stsc-Chr151798 23839 24625 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151798g00006 FAR1 2.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151798g00006 - K17604 adu:110280446 87.0409