Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151797g00003 ATGATATATGATCTTTTGGCAAATTGCAATGAGTTCTTTTTGCCTAATGTTTTGCTATATGTTGTTGACAGAACAGGTTCTGTGGATTTAAGAGCTTTGATGATTGAACAGAAACCATACATGGTCAGAGTTAATCTTCATTTTTCCTATGTACTATTCTTGCTGATTTACTTCATTTTTTGGATCTTGCTTAACACCACACAAGCTGATGATATTGGTGTTTACTGGGGCCAAAATGGTAATGAGGGAACTCTTGCTAATACATGTGCATCAAGAAAGTACTCCTTTGTAAACTTAGCATTCCTTACCACATTTGGAAATGGTGAATCTCCAGTGCTAAACCTGGCAGGTCATTGTGATGCTTCTTCAAAAGGGTGCACTGGTCTTAGCTTAGATATAAAGACCTGCCAGAAGCAAGGGATCAAGGTCATGCTCGCGATTGGAGGAGGATCTAGTACTTCCCAATTGACTTCTTCTGAAGATGCTAAAACTGTTGCTGAGTATCTCTGGAACAATTTCTTGGGTGGTAATTCATCTACGCGCCGTCCTCTTGGGGACGCGGTGCTAGATGGGATAGAATTTGTCCCAGGTGATAATGGATACTCGATATACTGGATGGACCTTGCGCGTTACCTCAAGTCGAAATCAACACAGAATGTTACCAACCCTGACCGTTACCTCAGGTCGAAATCAACACAGAATGTTACCGTAAGTGCAGCTCCTCAGTGTCCCTTTGTCAGTGCTGAGAACTCTACCTTTAATGGTGGATTTTTCGACTATCTTTCGGTACAATTCTACAACAATCCTCAATGCAATTTTGTGAGTAACACTACTAGTGGATTCATAGATGCATGGAACCAATGGACCAATTTGAAAGTGAAGAAAATATTTCTGGAGTTGCCAGCATCTTCTGATGTAGCTGTATCTGGCTATATTCCTGCAAATTTGTTAAATTCTCAGGTCCTTCCAATCATAAGGAACTCATCTAAGTATGGTGGCATAGTGTTGTGGGACAGATACAGTGATGTTAAGAGCAATTATAGTGATTCCATCAAATTCAATGCAGCGCAAGCACCCAGTCCTGTGGAAAGCATCAAGCCTCATGCAGAAGGGCAAGCACCTATTCCTGTGGAAAGCATCAAACCTCATGCAGGAAGCAGAAAACACCATATAGTTATAAGGATTGTTATTGGTGTGGGAGCTGCTATTGCAATAAGTTTAATTTGTTACTTGAGCTGTGTATGTTGGAGGAAGTACAAAGCAGAAGTGGATACAAGAAACAGGCAAAAGAAGCTAATACATGACATTGGAGGTACTGCAATGCTCTCCAGGATGAATTACATAGCAAAGAAGTTTAGAACTGAGAGTAACACAAGCGATGAGATTGAAATATTCAGTTTTGAAAGCATGGTCGCTGCTACAAACAACTTCTCAAGCTCAAATAAGCTTGGTGAAGGAGGATTTGGACCTGTTTATATGGGTACATTGACAAACCAACAAGAAATTGCGATAAAGCGACTGTCTATGAGTTCAGGACAAGGGCTAACAGAGTTTAAGAATGAAGCTAAACTCATTGCAAAACTCCAGCACACTAATCTTGTGAAGCTTATAGGGCTCTGCATCCAAAGAGAAGAAAGAATGTTGGTCTATGAGTACATGTCTAATGGAAGCTTAGACTTGCACTTATTTGATGCAGAAAGAAGGAACATTTTGGATTGGGAAAAGCGGCTTAACATTATCGAAGGCATTGCTCAAGGACTGTTATATCTTCACAAGTATTCAAGGCTAAAAGTGATTCATCGCGATTTGAAAGCGAGCAACATATTACTTGACGATGAGATGAAACCTAAGATATCGGATTTTGGCATGGCTAGAATACTAGGACTAACAGGTTCCGAAGAGAAAACGAACCGAATTGTCGGAACACATGGTTATATGTCTCCAGAATATATGTTAAATGGCGTCGTCTCCCCGAAAGTAGACGTTTTCAGCTTTGGCGTATTGCTGCTAGAGATTCTCAGTGCAAGAAAGAATACTTCCTCTTACAACACTGATTTTCCACTACTCAATCTCATCGGATATGCATGGAAGTTATGGAATGAAGGTAGGGCTCTAGAGCTAATGGATCATGGATTAAATGAAACAAGCAACCGTAAAGAAGTGCTGAGATGTATCCACATTGGTCTGTTATGTGTGCAAAACTATCCAACAGATAGACCTACCATGGTTGATGTTGTCTCTTTTCTGTCAAATGATGCTATCCAACTTGCTCAGCCAAAGCAGCCAGCATTCTTCATCAATGTTGATACAAACCAACAACAATTGCATAGTAGCACACAAGAAATTTTCTCCAAAAACAGTATGACGATATCTGATGTGAATGGCAGATGA 2391 0.4028 MIYDLLANCNEFFLPNVLLYVVDRTGSVDLRALMIEQKPYMVRVNLHFSYVLFLLIYFIFWILLNTTQADDIGVYWGQNGNEGTLANTCASRKYSFVNLAFLTTFGNGESPVLNLAGHCDASSKGCTGLSLDIKTCQKQGIKVMLAIGGGSSTSQLTSSEDAKTVAEYLWNNFLGGNSSTRRPLGDAVLDGIEFVPGDNGYSIYWMDLARYLKSKSTQNVTNPDRYLRSKSTQNVTVSAAPQCPFVSAENSTFNGGFFDYLSVQFYNNPQCNFVSNTTSGFIDAWNQWTNLKVKKIFLELPASSDVAVSGYIPANLLNSQVLPIIRNSSKYGGIVLWDRYSDVKSNYSDSIKFNAAQAPSPVESIKPHAEGQAPIPVESIKPHAGSRKHHIVIRIVIGVGAAIAISLICYLSCVCWRKYKAEVDTRNRQKKLIHDIGGTAMLSRMNYIAKKFRTESNTSDEIEIFSFESMVAATNNFSSSNKLGEGGFGPVYMGTLTNQQEIAIKRLSMSSGQGLTEFKNEAKLIAKLQHTNLVKLIGLCIQREERMLVYEYMSNGSLDLHLFDAERRNILDWEKRLNIIEGIAQGLLYLHKYSRLKVIHRDLKASNILLDDEMKPKISDFGMARILGLTGSEEKTNRIVGTHGYMSPEYMLNGVVSPKVDVFSFGVLLLEILSARKNTSSYNTDFPLLNLIGYAWKLWNEGRALELMDHGLNETSNRKEVLRCIHIGLLCVQNYPTDRPTMVDVVSFLSNDAIQLAQPKQPAFFINVDTNQQQLHSSTQEIFSKNSMTISDVNGR 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151797g00003 796 SUPERFAMILY (Trans)glycosidases 72 352 IPR017853 -
Stsc151797g00003 796 Gene3D Transferase(Phosphotransferase) domain 1 553 764 - -
Stsc151797g00003 796 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 442 552 - -
Stsc151797g00003 796 ProSiteProfiles Protein kinase domain profile. 477 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151797g00003 796 Pfam Glycosyl hydrolases family 18 72 304 IPR001223 GO:0005975
Stsc151797g00003 796 FunFam Acidic endochitinase SE2 70 355 - -
Stsc151797g00003 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Stsc151797g00003 796 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 242 792 - -
Stsc151797g00003 796 SUPERFAMILY Protein kinase-like (PK-like) 458 786 IPR011009 -
Stsc151797g00003 796 Gene3D Phosphorylase Kinase; domain 1 450 552 - -
Stsc151797g00003 796 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 70 358 IPR001223 GO:0005975
Stsc151797g00003 796 Pfam Protein tyrosine and serine/threonine kinase 480 749 IPR001245 GO:0004672|GO:0006468
Stsc151797g00003 796 CDD STKc_IRAK 483 749 - -
Stsc151797g00003 796 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 553 757 - -
Stsc151797g00003 796 SMART serkin_6 477 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151797g00003 796 CDD GH18_hevamine_XipI_class_III 71 352 IPR045321 -
Stsc151797g00003 796 Gene3D Glycosidases 71 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151797g00003 Stsc-Chr151797 15246 19145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151797g00003 444 796 Receptor kinase-like Gene Family AT4G11480 49.171 3.91e-114 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151797g00003 PK_Tyr_Ser-Thr 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151797g00003 - - adu:107464076 1281.16