Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151783g00001 ATGGAAGGCGAGCATCTTCATCAACATCAAAGATCAAAATTGAACAAAGCAAAGCAGATTGTGAAGCTAAGGGGAATGCTTCGAAGGTGGCACAGTTTCTCATCCTCATCATCCTCACCCTCACCCTCAATCTCATCATCACCAAACATCTCTAGTAGCCCCAACTACAACATCATTGACTATTCTGAATTTCAAGAAAATATTGCCATCAATGACGAAAATACCCCTAGGAGGAACTTGGATGAAGAAGTAGAGGGTCACAAATGTGAGAGCCCTGAGCCACCACCTGATGTTCCAAAAGGGTACTTGGCGGTTTATGTTGGGCCTGAGCTCAGGAGATTCATCATTCCAACAAGCTATCTTACACATTCTCTCTTCAAACTGTTGCTGGAGAAGGCTGAAGATGAGTTTGGGTTTAACCATAATGGTGCTCTCACTATTCCTTGTGAGACTGAGACCTTCAAGTACCTCCTCCGATGCATAGAGACTAACTATGACACCCATCAAGATACCTGTTCTACTGGGAATATAGGAACTCTGGAAGCATAA 549 0.4353 MEGEHLHQHQRSKLNKAKQIVKLRGMLRRWHSFSSSSSSPSPSISSSPNISSSPNYNIIDYSEFQENIAINDENTPRRNLDEEVEGHKCESPEPPPDVPKGYLAVYVGPELRRFIIPTSYLTHSLFKLLLEKAEDEFGFNHNGALTIPCETETFKYLLRCIETNYDTHQDTCSTGNIGTLEA 182
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc151783g00001 182 Pfam Auxin responsive protein 89 161 IPR003676 GO:0009733
Stsc151783g00001 182 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 82 157 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc151783g00001 Stsc-Chr151783 4578 6025 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151783g00001 6 162 Calmodulin-binding Proteins AT3G43120 50.625 3.86e-51 160