Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151776g00002 ATGCTGGGAATTCATGGAGATGGTGAGATGAGGCAATTTGTTGCGAAGCTGTATAACAAGATTAGGCCTTACTTTGAAACTGCACGTTTTCTTTCTAATATTAGTGGAAAAACAAATGAAAGTGGGGGTGGCCTTGAAGATCTACAAGGGATGCTTCTTTCTGAGATGGGACATGAGCTAAAGAGCAAGATAGAAAACACATTCAAAGGGGCCGCTGAAATAAAACAAAGGCTAGGCCGAAAAAGAGTTCTTCTAGTTTTGGATGATGCTGATAGAATCCAGCAACTAGAGTCATTAGCAGCAAGAGAAGATTGGTTTGGTGCTGGTAATCAGGTTGCTGAGGAAGATGATGTAGAAGAAGGAGACGTTGTGGGCTTTACGAATAATAGTCGCTTTGTAATTAAACTGCTGTGTGATGCCAACATTGAAGTGGTCTTCATCATTGGCATGGGTGGGTTGGGCAAGACTACCCTTGCTCAAAAGATCTATGATGACAGACAATTTTCCACATTGACATATCAAAATTTACCTGAGAAGGATATAAAGAAGACTGTAAGAAATTATCTGAAGGGGAAAAAGTACTTGATAGTGCTTGATGATATTTGGGAGCCTGAAGTATGGGACGATCTAAAAGCAGCTTTTCCAAATCAAAGCAATGGTAGCAAAATTTTAATAACTAGTCGTAATGAAGAGGTGGCAAATTTTACAAGCTCAAGAACTTACAAGCTTCCTTTGCTTGATGAAAATGAAGGCTGGGAACTGTTTTGCAAGAAGGTGTTTTCGGCTAGAGAAATTGTTGAAAGTTGTGGAGGTTTACCACTTGCTATTGTTGCTATAGCCGGAGTTGTTCGCAAGAAGGAAATGTTGGAAAGTGAATGGGAAAGAGTTAAGGAGTGCATCGACTGGCATCTCACCAAGGACATGACCAAAGTCATGGATGTACTAAAACTTAGCTATGATAGCTTGTCTGAAGAATTGAAGCCATGCTTCCGATATATTGGTATCTACCCTGAAGATTTTCAGATTCCTGCTAGGGAATTAATTCAATTATGGATGGCTGAGGGTTTCTTAGGGCCACAAGAAACTGGATTACCAAATGCTCCAGAACCAGTAGTTGTTGGTAAGGAATACTTAAAAGAGCTAGTGGATCGTAACATGGTACATGTGGCAAGAGAGATGATTAGTAAGGGTAAAAAATGCATAATCCATGATCTCTCCCGTGATCTCTGCATAATATTGAGCAAAGCTGATAAGTTTTTTGATGTTTGCACAGGGCCCAATATCCATACTCTAAGTAACCCTCAAAGATTGTCTTTGTTATGCAGTGAAACGTCTTGTATATCTTCAACCATTTGGTTGGAAGCTACCACCAAACGTGAATGGAACAATAATGTGGAATCTTTCAAAACTCTGTGGAGTGCATTTAGATACAGCAGCAGCATGCCTATTCGGGGACGGGAGATTTCCAAACTTGAGAAAGTTGGAAGTAATGTTGAATAG 1500 0.4 MLGIHGDGEMRQFVAKLYNKIRPYFETARFLSNISGKTNESGGGLEDLQGMLLSEMGHELKSKIENTFKGAAEIKQRLGRKRVLLVLDDADRIQQLESLAAREDWFGAGNQVAEEDDVEEGDVVGFTNNSRFVIKLLCDANIEVVFIIGMGGLGKTTLAQKIYDDRQFSTLTYQNLPEKDIKKTVRNYLKGKKYLIVLDDIWEPEVWDDLKAAFPNQSNGSKILITSRNEEVANFTSSRTYKLPLLDENEGWELFCKKVFSAREIVESCGGLPLAIVAIAGVVRKKEMLESEWERVKECIDWHLTKDMTKVMDVLKLSYDSLSEELKPCFRYIGIYPEDFQIPARELIQLWMAEGFLGPQETGLPNAPEPVVVGKEYLKELVDRNMVHVAREMISKGKKCIIHDLSRDLCIILSKADKFFDVCTGPNIHTLSNPQRLSLLCSETSCISSTIWLEATTKREWNNNVESFKTLWSAFRYSSSMPIRGREISKLEKVGSNVE 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151776g00002 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 333 IPR027417 -
Stsc151776g00002 499 Gene3D - 245 323 IPR042197 -
Stsc151776g00002 499 Gene3D - 324 411 IPR036388 -
Stsc151776g00002 499 Gene3D - 11 113 IPR027417 -
Stsc151776g00002 499 Gene3D - 171 242 IPR027417 -
Stsc151776g00002 499 Gene3D - 118 170 IPR027417 -
Stsc151776g00002 499 FunFam Probable disease resistance protein At1g63360 319 412 - -
Stsc151776g00002 499 Pfam NB-ARC domain 135 167 IPR002182 GO:0043531
Stsc151776g00002 499 Pfam NB-ARC domain 175 320 IPR002182 GO:0043531
Stsc151776g00002 499 PRINTS Disease resistance protein signature 77 91 - -
Stsc151776g00002 499 PRINTS Disease resistance protein signature 269 283 - -
Stsc151776g00002 499 PRINTS Disease resistance protein signature 1 8 - -
Stsc151776g00002 499 PANTHER DISEASE RESISTANCE PROTEIN RP 114 438 IPR044974 GO:0006952
Stsc151776g00002 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 99 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151776g00002 Stsc-Chr151776 4455 6174 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151776g00002 141 336 WRKY Transcription Factor Family AT5G45050 26.667 1.44e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151776g00002 - - ahf:112744808 632.484