Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151773g00002 ATGGGTGACAAATCTGAAACCTGCCAAACCTTCTCCTTTTCTTCTTCGATCTCTAATATTGACGCCGCTGCCACTACCGCTGGTCGATGGCGCTGCCGTGCCTCTTGCGCGGTGTGCTTCTCCCTGGTCGACGGCAACCGCAAGGAGGTAGCAACCACCGTGGTTGAACTCAGATGTTGTGGCTTTGGCGGTGGCCTCAGCACCAACTCCACCCTTCCCTGGATGCGAGATGCAATCTCTGTCCCTCCCTCTGCGATTGCGCCGTCCTCGGCGTCGTGGTTGCTCACGGTTTCACTTCCGCCGGTGATGAAGGCGGCAACCGCCGAGTGTGACAACGGATCTACAACCATTGATGTCGCGAACAAGTCGAATGACATTCTAAGGTCGAAGGACATTCTAAGGAAGCAAACAGCTCTGAAGGGAGAGAGGAAAGTACCTGTTCTCATTGGGATTTCTGTTGCATTTTCACTTCATGTGATTAGCATCTATTGGTGGTATCAGAATGATGATCTGATGTATCCATTGGTCATGCTTCCTCCGAGAGAGATACCGCCTTTCTGGCATGCGATTTTCATCATCATGGTTAATGATGTGTTTCCTCCTCACTTATGA 612 0.5131 MGDKSETCQTFSFSSSISNIDAAATTAGRWRCRASCAVCFSLVDGNRKEVATTVVELRCCGFGGGLSTNSTLPWMRDAISVPPSAIAPSSASWLLTVSLPPVMKAATAECDNGSTTIDVANKSNDILRSKDILRKQTALKGERKVPVLIGISVAFSLHVISIYWWYQNDDLMYPLVMLPPREIPPFWHAIFIIMVNDVFPPHL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151773g00002 203 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 128 198 IPR044235 GO:0061630|GO:1904294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151773g00002 Stsc-Chr151773 6283 7771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151773g00002 126 197 C3H Transcription Factor Family AT5G01960 69.444 4.55e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151773g00002 - K22379 aip:107639742 145.591