Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151772g00004 ATGCCAATCAACTATGTGAGGGATAGTTGGATAAGCCAGAGAGATAGGTTTTTCAATATGCAGCCTACCAATCACAATTATCCTGTTCTTCCGGAAACTTCAGCAGCTCCGACACAAATTACGCAGCCACCTGATACATCAAGAGATGAGAAGGCTGATAGAGTTGAAGAAACAGTGCAAAAGGAAGGAGTTCAACCAAAGAAAAGGCAAGGCAGGGCTGCTTCAACAACTCCAAAAGCGAAGAAACCAAGGAAGCCAAAGGAGAAAAGCAATGCTCCTGTTCAACGATCGAAGCCCATGAAGACAATTGAGTTTGTAATAAATGGAATGGATATGGACATTTCCAGTTTGCCCATTCCAGTTTGTTCATGCACCGGGACTCCTCAGCAGTGTTATCGCTGGGGCTGTGGAGGATGGCAGTCTGCTTGTTGTACTACAAATGTGTCAACATATCCATTGCCAATGAGCATGAAACGGCGCGGGGCAAGGATAGCTGGACGGAAAATGAGCCAGGGTGCTTTTAAGAAGGTTTTAGAGAAATTAGCAGCTGAAGGCTATAATTTTGGTAATCCAATTGACCTGAGGACGCACTGGGCTAGACATGGTACCAACAAATTCGTCACTATCAGGTAG 633 0.4502 MPINYVRDSWISQRDRFFNMQPTNHNYPVLPETSAAPTQITQPPDTSRDEKADRVEETVQKEGVQPKKRQGRAASTTPKAKKPRKPKEKSNAPVQRSKPMKTIEFVINGMDMDISSLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSTYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFGNPIDLRTHWARHGTNKFVTIR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151772g00004 210 MobiDBLite consensus disorder prediction 22 45 - -
Stsc151772g00004 210 MobiDBLite consensus disorder prediction 22 99 - -
Stsc151772g00004 210 Pfam GAGA binding protein-like family 4 210 IPR010409 -
Stsc151772g00004 210 MobiDBLite consensus disorder prediction 46 68 - -
Stsc151772g00004 210 SMART GAGA_bind_2 1 210 IPR010409 -
Stsc151772g00004 210 PANTHER - 7 210 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151772g00004 Stsc-Chr151772 14737 16708 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151772g00004 3 210 BBR or BPC Transcription factor family AT2G01930 58.261 5.35e-80 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Stsc151772g00004 GAGA_bind 5.2e-88 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151772g00004 - - gmx:100791533 342.428