Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151771g00003 ATGAAGATGGAGATGGCCCCTTATTATTCACTCTCTGCAGTGGTTCTGCTTCTTGTGATTTCAGGCACCACTACTACTCTTGTCACAGCCACAGACCACATTGTTGGTGCAAACCGTGGCTGGAACCCTGGCATCAACTACACTCTTTGGGCCAATAACAACACTTTCTATGTTGGTGACCTCATCTCATTTAGGTACCAGAAGACACAGTACAATGTGTTTGAAGTGAACCAAACTGGTTATGACAACTGCACTATAGATAGTGCTGTTGGGAATTGGAGCAGTGGCAAGGACTTCATACCCTTAAATAAGGCCAAGAGATACTACTTCATCTGTGGCAATGGCCAATGTTTCAGTGGCATGAAGGTTTCTGTTCTTGTTCATCCTCTTCCTTCGCCTCCTTCGGCCGCCGTTGCGGCCGAGCATTCGTCAACAAAGTCAGCTTCTCCTCCTTCTGTGCTCTTGGACTGGGGACTCTGCTCTTTAATGGTGTCTATTGTGTTAGTTCGATTTGGATTGGATTGGATTTAG 531 0.4614 MKMEMAPYYSLSAVVLLLVISGTTTTLVTATDHIVGANRGWNPGINYTLWANNNTFYVGDLISFRYQKTQYNVFEVNQTGYDNCTIDSAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVLVHPLPSPPSAAVAAEHSSTKSASPPSVLLDWGLCSLMVSIVLVRFGLDWI 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151771g00003 176 Gene3D - 29 130 IPR008972 -
Stsc151771g00003 176 PANTHER BLUE COPPER PROTEIN 28 140 IPR039391 GO:0009055
Stsc151771g00003 176 ProSiteProfiles Phytocyanin domain profile. 31 129 IPR003245 GO:0009055
Stsc151771g00003 176 SUPERFAMILY Cupredoxins 30 128 IPR008972 -
Stsc151771g00003 176 CDD Phytocyanin_like_1 32 127 - -
Stsc151771g00003 176 FunFam Lamin-like protein 29 130 - -
Stsc151771g00003 176 Pfam Plastocyanin-like domain 41 121 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151771g00003 Stsc-Chr151771 10823 11872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151771g00003 5 175 Phytocyanin Superfamily AT5G15350 36.994 2.54e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151771g00003 - - adu:107463738 272.322