Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151771g00002 ATGGCAGACCTGAAAGATCCGCTTCTCCCTCCGAAACTGGCAACGGCTGTCAACCTAAGAGAGGCTGCCAATCGGCCGGTTGCTGCCGGAAGGCAGCTGTATCAAGGAGTGGATGTTCTTGAGTTAAAGAAGCGAGGGCAGAGTCTCCGGTCGTGGATACGAGTTGACACGGCAGGAGACTCTCAGATAATTGAGGTAGACAAGTTTACTATGATGAGGCGCTGTGATCTTCCAGCGCGCGATCTTCGCCTTTTGGATCCGCTTTTTGTCTATCCATCAACAATCCTAGGAAGGGAAAAAGCTATTGTTGTCAACTTAGAACAGATAAGGTGTATTATTACTGCAGATGAGGTTCTTCTCCTGCATTCCCTGGACAGTTATGCTTGGAACTATGTTATGGAGCTACAACGACGATTAACATCCTCCAGTGTAGGCGAGCCAGGGGATGTGTGGCAGCCAGACAATTCTGATGTGAACCGGAGCAGAGGAAATAGGAATTTTGATCATGAATTTAGCAATAACACCTCCCCGGATTATTTGCCGTTCGAGTTCAGGGCACTGGAAGTTGCATTAGAGGCAGCATGCACATTTCTTGACTCTCAGGTGGCAGAGTTAGAAATTGAGGCTTATCCTTTGTTGGATGAACTAACATCTAAAATCAGCACTCTGGATTTGGAGCGTGCTCGTCGGCTGAAAAGCAGACTCGTTGCCCTGACTCGCAGAGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGATGATGATGGTGATATGGCTGAGATGTATCTTACCGAGAAGAAAAGGCGGATGGAGTTGTCATTTTATGGAGATCAGTCTTTGTATAAATCAATTGATGGCATATCCATATCTGCTCCGGTTTCTCCTGTTTCATCACCTCAGGATTTTCGGAAACTTGAAAAGAGCATTAGCAGCGCTAGGAGCCGGCACGAGAGCACGAGGAGTTCTTATAGCGCTAACGAAAACATAGAAGAGCTTGAGATGTTACTAGAAGCATACTTTGTAGTAATTGATAGCACTCTAAACAAGTTGACATCGTTGAAAGAGTACATCGACGACACAGAAGATTTCATCAACATTCAACTGGATAACGTGCGGAATCAGCTCATCCAATTCGAGTTGTTGCTCACGACAGCAACATTTGTGGTTGCCATCTTTGGTGTTGTAGCAGGAGTGTTTGGGATGAATTTTGAGATTTCATTATTTGGTGTTCCTTCAGCATTTGAGTGGGTTCTTATAATCACAGGAGTTTGTGGAGTTCTCATATTTAGTGCATTTGTTTGGTTCTTCAAGTACAGAAGAATCATGCCCCTCTAG 1338 0.4484 MADLKDPLLPPKLATAVNLREAANRPVAAGRQLYQGVDVLELKKRGQSLRSWIRVDTAGDSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLHSLDSYAWNYVMELQRRLTSSSVGEPGDVWQPDNSDVNRSRGNRNFDHEFSNNTSPDYLPFEFRALEVALEAACTFLDSQVAELEIEAYPLLDELTSKISTLDLERARRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSLYKSIDGISISAPVSPVSSPQDFRKLEKSISSARSRHESTRSSYSANENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEISLFGVPSAFEWVLIITGVCGVLIFSAFVWFFKYRRIMPL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151771g00002 445 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 30 443 IPR039204 -
Stsc151771g00002 445 Gene3D Magnesium transport protein CorA, transmembrane region 383 442 - -
Stsc151771g00002 445 Gene3D Magnesium transport protein CorA, transmembrane region 130 376 - -
Stsc151771g00002 445 Gene3D - 37 123 - -
Stsc151771g00002 445 Coils Coil 228 255 - -
Stsc151771g00002 445 FunFam Magnesium transporter MRS2-1 383 443 - -
Stsc151771g00002 445 CDD Mrs2_Mfm1p-like 52 442 IPR039204 -
Stsc151771g00002 445 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 382 435 IPR045863 -
Stsc151771g00002 445 FunFam Magnesium transporter MRS2-1 40 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151771g00002 Stsc-Chr151771 5431 8112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151771g00002 1 445 MRS2 Gene Family AT1G16010 80.804 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151771g00002 K16075 - gmx:100801387 693.73