Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151764g00006 ATGGGGAACACATGTGGAAGTGGCAAACCTGTTGCTCATGTCTCTTCTTCTAACTTCTCCGGAAGTAAGAAGCCTGTAACTGTAAGTAATACGAAACGGAGTCCAAACTCTAACATGCAAAAAGCTGCTTTGAGAACGTCTGAATCGAATATTGATGACAAATTGATCTCCAATAACCTTAAGTCCTTAAGCTTCAATGATCTAAAGGAGGCAACTAAGAACTTCCGGCGAGAAAATTTAATCGGAGAGGGAGGATTTGGGCGTGTCTTCAAGGGATGGATAGATGGGAACAACTATGCTCCAACGAAACCGGGGAGTGGAATTGTAGTGGCCATTAAGAGTCTTAAGCCAGAAAGCTTCCAAGGTCATAAGGAATGGCTTGCAGAAGTCAATTATCTCGGGCAGCTTCACCATGAAAATCTGGTGAAACTAATTGGTTATTGCTTGGAGGGTAAAAACAGACTTCTAGTTTATGAGTTTATGCAGAAAGGAAGCTTGGAGAATCATTTATTCAAAAAAGGTGTTCAACCTATAGCCTGGGCCACACGGATCAATATTGCAATTGGCGTTGCGAGAGGATTATCATTCTTACATTCCCTGGATGCGAATGTTATCTTTCGTGATTTAAAGGCTTCCAATATCCTACTCGATTCAGATTTTAACGCAAAACTCTCGGATTTTGGCTTGGCAAGAGATGGTCCTACTGGAGATAACACTCATGTTTCAACCAGAGTTATTGGAACTCAAGGTTATGCTGCACCTGAGTATGTTGCTACAGGTCATTTAACCCCAAGAAGCGATGTATACAGCTTTGGTGTTGTCTTGTTAGAGTTATTAACCGGGAGGCGTGCACTAGAAGATGATAGGCCCGGATTTTCGGATGAAACANNNNNNNNNNTGGATTGGGCGAGGCCCTTCCTGAGTGATAACCGAAGAGTACTTAGAATCATGGATACTAGGTTGGGTGGTCAATACTCCAAGAAAGGAGCACAAGCTATGGCCTCACTAGCCTTGCAATGCCTAAACACCGATCCAAAACTTAGACCGCCTATGGTAGATGCTCTTGCAACACTAGAAGGACTCAGTTCATCGAATTCAATGCCAAGGACGCCACGATCTGGTATAGAGAGTAATTCAGCTAACCACTTTGGTCATTCGCACAAGTAA 1167 0.4276 MGNTCGSGKPVAHVSSSNFSGSKKPVTVSNTKRSPNSNMQKAALRTSESNIDDKLISNNLKSLSFNDLKEATKNFRRENLIGEGGFGRVFKGWIDGNNYAPTKPGSGIVVAIKSLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCLEGKNRLLVYEFMQKGSLENHLFKKGVQPIAWATRINIAIGVARGLSFLHSLDANVIFRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRALEDDRPGFSDETXXXXDWARPFLSDNRRVLRIMDTRLGGQYSKKGAQAMASLALQCLNTDPKLRPPMVDALATLEGLSSSNSMPRTPRSGIESNSANHFGHSHK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151764g00006 388 Gene3D Phosphorylase Kinase; domain 1 35 160 - -
Stsc151764g00006 388 Pfam Protein tyrosine and serine/threonine kinase 78 354 IPR001245 GO:0004672|GO:0006468
Stsc151764g00006 388 PANTHER OS01G0588500 PROTEIN-RELATED 39 361 - -
Stsc151764g00006 388 MobiDBLite consensus disorder prediction 358 381 - -
Stsc151764g00006 388 FunFam PTI1-like tyrosine-protein kinase 3 161 370 - -
Stsc151764g00006 388 SMART serkin_6 75 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151764g00006 388 SUPERFAMILY Protein kinase-like (PK-like) 57 365 IPR011009 -
Stsc151764g00006 388 ProSiteProfiles Protein kinase domain profile. 75 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151764g00006 388 MobiDBLite consensus disorder prediction 1 46 - -
Stsc151764g00006 388 ProSitePatterns Protein kinases ATP-binding region signature. 81 113 IPR017441 GO:0005524
Stsc151764g00006 388 FunFam Serine/threonine-protein kinase BIK1 42 160 - -
Stsc151764g00006 388 MobiDBLite consensus disorder prediction 358 388 - -
Stsc151764g00006 388 Gene3D Transferase(Phosphotransferase) domain 1 161 377 - -
Stsc151764g00006 388 CDD STKc_IRAK 81 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151764g00006 Stsc-Chr151764 20606 24236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151764g00006 30 358 Glycoside Hydrolase AT3G07070 48.204 9.71e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc151764g00006 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151764g00006 - - gmx:100800654 622.854