Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151760g00003 ATGTCAGTAACATCATCTTCATCATCTCGAGTTTATGACACCATTATTGAATGTGTCTCCGAATTAGCTCAATCAAACTCCATTGAAGCTCAAGAAAAGGCCCTTCAAACCCTAGCTTCCATCACCAAAGTAAGCCCCCAAAATCGAAACATTTTATCCCAAATTGATGGAGCAATCACAACCCTAGCCACACTCACAAACTCTCCCTCTCCAATAATCCAAACCCTATCTTTGCTAACCCTCTTCAACCTTTCTCTCAACCCAGACCTCAAGCATTCCCTCGCGGACATGCAAACCATTCATCATCTCAACTCTCGCATCGTCTCATCAAATTCTCCTGATTCATGCAAGCTCGCTTCAAGCTTGATATGCAGCCTGGCCATGCATGACAAGAACAAGGCCAAATTCGGCGTCGCCGGAACGGTTCAACTGCTAGTAAAAGCCATTAAAGACTCTCCACACGAGTTTCACCACCATCTATTGAGTTCGTTAGCGGAGCTTGTTCACTTCCATGGGAATTGCACTCTGGCTGTAAGATCTGGTGCAATTCCGGTGCTACTCGGTGTTGTGAAGGAAACCGTTGACGAAGACTTAGCTTCTACTTCTCTTGTGGTTCTTGGTTTGCTTGCGAGGTTCGACGAAGGCTTGAATCGGTTGAAGAAAAGGGAAGAGATAGTGAGTGATATGTTGTGTGTTTTGAAAGGGAGATCCATGATGAGCAAAGAGGGTGCGGTTGATATTCTGCTTCGACTGTTGGATGACCATTGCGAAAGATGCGTGAACGAGGCTCTGTTGTTGCCGGAATTCACCATGGCAGTGACGGATCTTTCTGTGAGAGGATCTGTGAAGCTTCGAGGTAAGGCTAATTTGCTCTTGAAGAAGATGGCTGATGCCAGCTTAGTTTCTGATGTGGAACAATGGATCTGA 927 0.4574 MSVTSSSSSRVYDTIIECVSELAQSNSIEAQEKALQTLASITKVSPQNRNILSQIDGAITTLATLTNSPSPIIQTLSLLTLFNLSLNPDLKHSLADMQTIHHLNSRIVSSNSPDSCKLASSLICSLAMHDKNKAKFGVAGTVQLLVKAIKDSPHEFHHHLLSSLAELVHFHGNCTLAVRSGAIPVLLGVVKETVDEDLASTSLVVLGLLARFDEGLNRLKKREEIVSDMLCVLKGRSMMSKEGAVDILLRLLDDHCERCVNEALLLPEFTMAVTDLSVRGSVKLRGKANLLLKKMADASLVSDVEQWI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151760g00003 308 SUPERFAMILY ARM repeat 14 258 IPR016024 -
Stsc151760g00003 308 Gene3D - 2 299 IPR011989 -
Stsc151760g00003 308 PANTHER U BOX DOMAIN-CONTAINING 17 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151760g00003 Stsc-Chr151760 26969 27942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151760g00003 14 293 U-box Gene Family AT1G23030 22.695 1.69e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151760g00003 - - gmx:121174819 393.275