Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151751g00002 | ATGGGTGGAGAGAACGGTGTAGATGGGAAAGAGCAGAGTAAGAATAATAAAAGTGATGAGGAGGCAAACACATCAGGGAATCAAGGAGAAGGAAAAAGCGTCAAGGGTGAAAAGGATGAGAAGAAGAACAAGAAAAATGAGAAGTCCGAAACGGTGCCGTTTTACAAGCTGTTCCACTTTGCAGATTCCTTAGACATTATTTTGATGGTAACTGGAACAGTTGGTGCCATTGGAAACGGTATGGGTTTGCCTCTCATGACGCTTCTCTTTGGTCAAATGATTGATACCTTCGGTTCCAACCAGAAAAACCAAGACGTAGTGCAACAAGTTTCCAAGGTTGCATTAAAATTTGTGTACTTGGCAATTGGAAGTGGGGTGGCAGCGTTCCTCCAGGTTAGTTGCTGGATGGTCACAGGAGAGAGACAAGCAGCAAGAATCAGGGGATTGTATTTGAAAACTATATTGAGACAAGATGTTGCTTTCTTTGATAAAGAAACAAACACAGGTGAGGTTGTTGGCAGGATGTCCGGTGACACAGTTCTCATTCAAGATGCCATGGGTGAGAAGGTTGGAAAGTTTATTCAGCTAGTAGCAACATTTATTGGTGGATATATGATTGCGTTTATCAAAGGGTGGCTTCTTACTATGGCTACCAGAGGTCAAACTGCATATGCAAAAGCTGCACATGTTGTTGAACAAACTATTGGCTCAATAAGAACTGTTGCATCCTTTACAGGGGAAAAGCAAGCAGTATCTGATTATAAAAAGCATCTTGTGGAAGCCTACAACTCAGGAATACATGAAGGTGCCATGGAAGGGATAGGTATGGGCACAATGATGCTTTTTATCTTCTGTGGCTATGCTATGGCTGTATGGTTTGGCGCAAAGATGGTAATGGAAAAGGGATATAATGGCGGCACGGTGGTTAATGTCATTGTTGCTGTCTTAACAGCTTCCATGTCTCTTGGTCAGGCATCTCCTAGCATGAGCGCTTTCGCCGCAGGTCAGGCTGCGGCATACAAAATGTTCGAGACAATAGAGAGGAAGCCGGAGATAGATGCTTATGATCCGAATGGAAAAACATTGGAGGATATCCAGGGTGACATTATGTTAAAGGATGTTTGTTTCAGTTATCCATCAAGACCTGAGGAATTGATATTCAGTGGACTCTCCCTGCATATACCGAGTGGCACCACCGCGGCTTTAGTCGGAGAAAGTGGAAGTGGGAAGTCCACAGTCATCAGTTTGATAGAAAGATTCTATGATCCACAAGCTGGTGAAGTCCTCATTGATGGCATTAACTTGAAAGAGTTTCAGCTTAGGTGGATCAGAGGAAAAATTGGCCTTGTTAGCCAGGAACCGGTTCTGTTTGCTTCTAGCATTAGGGACAACATTGCATATGGAAAGGAAGGAGCAACAATTGAAGAGATCAAATCCGCCTCTGAGCTAGCAAATGCTGCCAAGTTCATCGATAAATTGCCACAGGGATTGGACACAATGGTTGGTGAGCATGGTCTTCAGTTGTCTGGGGGACAGAAGCAGCGCATTGCGATTGCAAGAGCAATCCTGAAAGATCCGAGGATCCTGCTTCTAGACGAAGCCACGAGTGCACTCGATGCAGAGTCTGAAAGGGTAGTGCAAGAGGCTCTAGACAGGATCATGGGCAACAGAACTACTGTTGTCGTGGCGCATCGCCTGAGCACAGTGAGGAATGCTGATATGATTGCTGTGATTCATAGAGGGAAGATGGTTGAGCAAGGAACACACTCAGAATTACTCAAGGATCCTGAGGGAGCTTACTCTCAGCTTATACGTTTGCAAGAAGTAAACAAGGAATCAAAAGAAAATGCAGATCATCAAAGCAAGAATGAACTTTCATCAGAGTCTTTTAGACAATCCAGTCAAAGGAAATCACTCCAAAGATCTATCAGCAGGGGATCATCAATTGGGAACAGCAGCCGCCACTCCTTTAATGTTTCATTCGGTTTGCCTACCGGAGTTAATGTCTCCGATCCTGAGCATGAAACCTTAGAAGCTAAGGAAAAAGCGCCGGAGGTTCCACTAATGCGCCTCGCCACCCTCAACAAGCCGGAGATTCCAGTTCTTATCGTTGGATCTTTAGCAGCCATAGGAAATGGAGTCATATTTCCAATATTCGGACTCTTCCTTTCCAGTGTCATCAAAACATTCTATGAGCCATTTCATGAGATGAGAAAGGACTCCAGGTTTTGGGCACTAATGTTTGTGATACTTGGCCTTGCATCATTTATGGTGATTCCAGTCCGGGCATACTTCTTTTCTGTGGCTGGATCAAAGTTAATTCGACGTATAAGGCTATTATGTTTCCAGAAGGTTGTCAACATGGAAGTTGGTTGGTTTGATGAGCCAGAGAACTCGAGTGGCGCAGTTGGCGCGAGGCTCTCGGCCGATGCTGCATCGGTTCGCGCCCTTGTTGGCGATGCACTTGGCCTCTTAGTTAATAACATAGCATGCGCTTTGGCTGGTTTAATCATTGCCTTTGTTGCAAGCTGGCAGTTGTCATTGATAGTTCTTGTCTTGATTCCCCTGATTGGTATAAATGGTTATATTTCAGTGAAATTCATGAAAGGATTTAGTGCAGATGCAAAGATGATGTATGAGGAAGCAAGCCAAGTTGCAAATGATGCAGTTGGAAGCATAAGAACAGTTGCCTCATTCTGTGCTGAAGACAAGGTTTTGGAACTATATAGGAAGAAATGTGAAGGCCCTATGAAAACTGGGATCAGACAAGGAGTGATTAGTGGATCAGGATTTGGCATTTCATTTTTCTTGCTGTTTTGTGTCTATGCAACAAGTTTCTATGCCGGAGCTAGGTTTGTGAAAGCTGGGATGGCCACATTCTCAGACGTTTTCCGGGTTTTCTTTGCTTTAACTATGGCTGCTACTGGAGTATCCCAATCAAGTTCCTTTGCCCCTGACTCAAGCAAAGCCAAGATAGCTGCTGCTTCCATATTTGGAATAATTGATAGGAAATCAAAGATAGATCCTAGTGATGAGTCTGGTAGAACCTTGGATACTGTCAAGGGCGATATCGAGATTCGCCATTTAAGCTTCAGGTATCCATCTCGGCCGGATGTACAAATTTTACGGGATCTCAACCTGGCCATCAATTCTGGCAAGACAGTAGCACTTGTTGGTGAAAGTGGAAGTGGGAAATCAACAGTGATATCGTTGTTACAGAGATTTTATGAGCCAGAGTCAGGTGAAATCACACTAGATGGTGTGGAAATAAGGCAGTTACAGCTAAAGTGGTTAAGGCAACAAATGGGACTTGTAAGCCAAGAACCAGTGTTGTTCAATGAATCCATCCGTGCAAATATAGCTTATGGAAAAGGTGGGGATGCAACTGAATCAGAAATCATATCTGCAGCAGAATTGGCCAATGCTCATAGGTTCATCAGTGCCTTGCATCAGGGATACGACACTATAGTGGGAGAGAGGGGAACCCAATTATCTGGTGGCCAAAAACAACGTGTGGCAATAGCACGTGCCATAATCAAAAGTCCAAAGATATTGCTATTAGATGAAGCAACAAGTGCATTAGATGCAGAGTCAGAAAGAGTTGTTCAAGATGCATTAGACAGAGTCGTGGTCAACAGGACCACCGTGGTCGTCGCACACCGCTTGTCCACAATAAAAAACGCTGATGTTATTGCTGTGGTGAAAAATGGAGTTATAGTAGAGAAAGGAAGACATGAAACATTGATTAATATTAAGGATGGCTTTTATGCTTCTTTGGTTCAACTTCACACTAGTGCTTCAACAGCCTGA | 3810 | 0.4386 | MGGENGVDGKEQSKNNKSDEEANTSGNQGEGKSVKGEKDEKKNKKNEKSETVPFYKLFHFADSLDIILMVTGTVGAIGNGMGLPLMTLLFGQMIDTFGSNQKNQDVVQQVSKVALKFVYLAIGSGVAAFLQVSCWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFIQLVATFIGGYMIAFIKGWLLTMATRGQTAYAKAAHVVEQTIGSIRTVASFTGEKQAVSDYKKHLVEAYNSGIHEGAMEGIGMGTMMLFIFCGYAMAVWFGAKMVMEKGYNGGTVVNVIVAVLTASMSLGQASPSMSAFAAGQAAAYKMFETIERKPEIDAYDPNGKTLEDIQGDIMLKDVCFSYPSRPEELIFSGLSLHIPSGTTAALVGESGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIRDNIAYGKEGATIEEIKSASELANAAKFIDKLPQGLDTMVGEHGLQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRIMGNRTTVVVAHRLSTVRNADMIAVIHRGKMVEQGTHSELLKDPEGAYSQLIRLQEVNKESKENADHQSKNELSSESFRQSSQRKSLQRSISRGSSIGNSSRHSFNVSFGLPTGVNVSDPEHETLEAKEKAPEVPLMRLATLNKPEIPVLIVGSLAAIGNGVIFPIFGLFLSSVIKTFYEPFHEMRKDSRFWALMFVILGLASFMVIPVRAYFFSVAGSKLIRRIRLLCFQKVVNMEVGWFDEPENSSGAVGARLSADAASVRALVGDALGLLVNNIACALAGLIIAFVASWQLSLIVLVLIPLIGINGYISVKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVLELYRKKCEGPMKTGIRQGVISGSGFGISFFLLFCVYATSFYAGARFVKAGMATFSDVFRVFFALTMAATGVSQSSSFAPDSSKAKIAAASIFGIIDRKSKIDPSDESGRTLDTVKGDIEIRHLSFRYPSRPDVQILRDLNLAINSGKTVALVGESGSGKSTVISLLQRFYEPESGEITLDGVEIRQLQLKWLRQQMGLVSQEPVLFNESIRANIAYGKGGDATESEIISAAELANAHRFISALHQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDRVVVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINIKDGFYASLVQLHTSASTA | 1269 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151751g00002 | 1269 | Gene3D | - | 367 | 624 | IPR027417 | - | |
Stsc151751g00002 | 1269 | CDD | ABC_MTABC3_MDL1_MDL2 | 369 | 607 | - | - | |
Stsc151751g00002 | 1269 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1014 | 1262 | IPR027417 | - | |
Stsc151751g00002 | 1269 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1024 | 1261 | IPR003439 | GO:0005524 | |
Stsc151751g00002 | 1269 | PANTHER | ABC TRANSPORTER B FAMILY | 33 | 609 | IPR039421 | - | |
Stsc151751g00002 | 1269 | MobiDBLite | consensus disorder prediction | 611 | 625 | - | - | |
Stsc151751g00002 | 1269 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 703 | 989 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Stsc151751g00002 | 1269 | Gene3D | - | 1014 | 1268 | IPR027417 | - | |
Stsc151751g00002 | 1269 | FunFam | ABC transporter B family member 1 | 682 | 990 | - | - | |
Stsc151751g00002 | 1269 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 369 | 605 | IPR003439 | GO:0005524 | |
Stsc151751g00002 | 1269 | MobiDBLite | consensus disorder prediction | 626 | 652 | - | - | |
Stsc151751g00002 | 1269 | Gene3D | ABC transporter type 1, transmembrane domain | 65 | 217 | IPR036640 | GO:0005524|GO:0016020 | |
Stsc151751g00002 | 1269 | CDD | ABC_MTABC3_MDL1_MDL2 | 1024 | 1262 | - | - | |
Stsc151751g00002 | 1269 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 70 | 334 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Stsc151751g00002 | 1269 | MobiDBLite | consensus disorder prediction | 32 | 46 | - | - | |
Stsc151751g00002 | 1269 | FunFam | ABC transporter B family member 1 | 359 | 608 | - | - | |
Stsc151751g00002 | 1269 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 358 | 607 | IPR027417 | - | |
Stsc151751g00002 | 1269 | ProSitePatterns | ABC transporters family signature. | 508 | 522 | IPR017871 | GO:0005524|GO:0016887 | |
Stsc151751g00002 | 1269 | Pfam | ABC transporter | 389 | 536 | IPR003439 | GO:0005524 | |
Stsc151751g00002 | 1269 | FunFam | ABC transporter B family member 9 | 991 | 1013 | - | - | |
Stsc151751g00002 | 1269 | SUPERFAMILY | ABC transporter transmembrane region | 56 | 353 | IPR036640 | GO:0005524|GO:0016020 | |
Stsc151751g00002 | 1269 | SMART | AAA_5 | 1051 | 1244 | IPR003593 | GO:0016887 | |
Stsc151751g00002 | 1269 | SMART | AAA_5 | 396 | 582 | IPR003593 | GO:0016887 | |
Stsc151751g00002 | 1269 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 694 | 1007 | - | - | |
Stsc151751g00002 | 1269 | Pfam | ABC transporter transmembrane region | 703 | 973 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Stsc151751g00002 | 1269 | Pfam | ABC transporter transmembrane region | 221 | 320 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Stsc151751g00002 | 1269 | Pfam | ABC transporter transmembrane region | 71 | 218 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Stsc151751g00002 | 1269 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 69 | 330 | - | - | |
Stsc151751g00002 | 1269 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Stsc151751g00002 | 1269 | Pfam | ABC transporter | 1042 | 1192 | IPR003439 | GO:0005524 | |
Stsc151751g00002 | 1269 | Gene3D | ABC transporter type 1, transmembrane domain | 218 | 998 | IPR036640 | GO:0005524|GO:0016020 | |
Stsc151751g00002 | 1269 | MobiDBLite | consensus disorder prediction | 611 | 652 | - | - | |
Stsc151751g00002 | 1269 | ProSitePatterns | ABC transporters family signature. | 1164 | 1178 | IPR017871 | GO:0005524|GO:0016887 | |
Stsc151751g00002 | 1269 | SUPERFAMILY | ABC transporter transmembrane region | 690 | 1008 | IPR036640 | GO:0005524|GO:0016020 | |
Stsc151751g00002 | 1269 | FunFam | ABC transporter B family member 1 | 1014 | 1264 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151751g00002 | Stsc-Chr151751 | 6984 | 14025 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151751g00002 | 52 | 1263 | Calmodulin-binding Proteins | AT2G36910 | 44.240 | 0.0 | 1037 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151751g00002 | K05658 | - | gmx:100800034 | 2037.31 |