Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151750g00007 ATGAAGATGGGAATTGCACTCGGACTAGCTGCGGCCGTTACTCTGCTGTTAGTAATGGGGACCCTCTTCTACAGAAGATGGAAGAAGCAAAACCCGAAACACCTTCTGGTTGATGCCTTTTTGGAGAGACATGGACATCTTCAAATCAAGAGGTACAGCTATTCCGAGATGAAAAAAGTGACCAACTCCTTCAAAAACAAACTAGGCGAAGGGGGATTTGGCAGTGTATACAAAGGACAATTAAAGGATGGGCGACATGTTGCAGTGAAGATCCTAAGTGAATTGAAAGGTGATGGTGAGGACTTCATCAATGAAGTTGCGAGTATGAGCAGAACCTCTCATGTTAACATTATTGCTCTTCTTGGCTTCTGCTTTCAAGGTTCCAAACGAGCTTTGATTTATGAATATATGCCCAATGGGTCCCTTGAGAAGTTAATCTATGAAGATAATGCTGTGATAGGGGATCGCCAATTGGATTGCCAAACTTTACATGATATTGCAATTGGTGTTGCCCGAGGACTTGAATATCTGCATAAGGGTTGCAATACTAGAATCTTGCATTTTGACATAAAGCCTCACAACATTCTGTTGGATGAAAATTTTTGTCCCAAAATTTCGGACTTTGGACTTGCAAAAGTTTGCACAAGAAAAGAAAGTAAAGTATCAATATTTGGTGCTAGAGGGACCGTAGGTTATATTGCCCCTGAGGTATTTTCTAGAAACTTTGGTGCAGTATCACATAAGTCGGATGTTTACAGTTACGGAATGATGGTCTTAGAAATGGTTGGAGGAAGAAAGAATATCAAGGCTGAAGTTGATGCATCAAGTGAGATATATTTTCCATATTGGATACACAATAGACTTGTGTCAAATCAAGAGCTTGGTTTGCAAAATATAAGAAATGAATATGATAATGAGATGGTCAGAAAGATGACAATAGTGAGTTTATGGTGCATTCAAACGAACCCTTCAACTCGACCATCAATTAGTAAGGTGGTGGAAATGTTGGAAGGAAGAACAGAGTTGTTGCAATTGCCTCCTAAACCATATTGGTTTTCTCCTTCAACCTCTCCCTGA 1077 0.3993 MKMGIALGLAAAVTLLLVMGTLFYRRWKKQNPKHLLVDAFLERHGHLQIKRYSYSEMKKVTNSFKNKLGEGGFGSVYKGQLKDGRHVAVKILSELKGDGEDFINEVASMSRTSHVNIIALLGFCFQGSKRALIYEYMPNGSLEKLIYEDNAVIGDRQLDCQTLHDIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFCPKISDFGLAKVCTRKESKVSIFGARGTVGYIAPEVFSRNFGAVSHKSDVYSYGMMVLEMVGGRKNIKAEVDASSEIYFPYWIHNRLVSNQELGLQNIRNEYDNEMVRKMTIVSLWCIQTNPSTRPSISKVVEMLEGRTELLQLPPKPYWFSPSTSP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151750g00007 358 ProSitePatterns Protein kinases ATP-binding region signature. 68 90 IPR017441 GO:0005524
Stsc151750g00007 358 SMART serkin_6 62 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151750g00007 358 ProSiteProfiles Protein kinase domain profile. 62 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151750g00007 358 Gene3D Transferase(Phosphotransferase) domain 1 137 349 - -
Stsc151750g00007 358 FunFam PR5-like receptor kinase 137 348 - -
Stsc151750g00007 358 PANTHER RUST RESISTANCE KINASE LR10-RELATED 46 353 IPR045874 GO:0004672
Stsc151750g00007 358 FunFam serine/threonine-protein kinase PBS1-like 36 136 - -
Stsc151750g00007 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Stsc151750g00007 358 Gene3D Phosphorylase Kinase; domain 1 40 136 - -
Stsc151750g00007 358 Pfam Protein kinase domain 65 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151750g00007 358 SUPERFAMILY Protein kinase-like (PK-like) 46 337 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151750g00007 Stsc-Chr151750 22050 23844 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151750g00007 8 349 Receptor kinase-like Gene Family AT4G18250 54.857 1.64e-129 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc151750g00007 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151750g00007 - - ahf:112712060 649.818