Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151750g00005 ATGGTCACACTCTACTACACAAGATGGAACAAGAAAAATCCTAAACAGACGCTGGGGATTAATTCCTTTTTGGAGAAACACGGGTCCCTTCAAATAAAGAGATATACTTATTCAGAGATGAAGAAGGTGACCAACTCCTTCAGAGATAAACTAGGCCAAGGAGGATTTGGCAGTGTATACAAGGGACAATTACAGGATGGACGCCATGTTGCAGTGAAGATCCTTAGTGAACTCAAAGGTGATGGTGACGATTTCATCAATGAAGTTGCTAACTTCGGACTTGCAAAAGTTTGCACAAGAAAAGAAAGTATTGTATCATTATTTGGTGCTAGAGGAACTGCAGGCTATATTGCCCCCGAGGTATTCTCTAGGAATTTTGGTGTAGTATCTCACAAGTCAGATGTTTATAGTTATGGAATGATGGTGTTAGAAATGGTTGGGCGAAGAAGGAATCTCAAAGTTGAAGTTGATGCATCGAGTGAGATATATTTCCCTCACTGGATATACAATCGGCTTGTGTCAAATCAGGAGCTTGATCTGCAAAATATAAGAAATGAATGTGATAATGAGATGGTCAGAAAGATGGCAATAGTGAGCTTATGGTGCATCCAAACCAACCCTTCAACTCGACCATCAATTAGTAAAGTGGTGGAAATGCTGGAAGGAAGAGCTGAGCTGTTACAGTTACCTCCTAAACCATTTTGGTTTTCTCCTTCAACATCTCCCTGA 729 0.4047 MVTLYYTRWNKKNPKQTLGINSFLEKHGSLQIKRYTYSEMKKVTNSFRDKLGQGGFGSVYKGQLQDGRHVAVKILSELKGDGDDFINEVANFGLAKVCTRKESIVSLFGARGTAGYIAPEVFSRNFGVVSHKSDVYSYGMMVLEMVGRRRNLKVEVDASSEIYFPHWIYNRLVSNQELDLQNIRNECDNEMVRKMAIVSLWCIQTNPSTRPSISKVVEMLEGRAELLQLPPKPFWFSPSTSP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151750g00005 242 Gene3D Transferase(Phosphotransferase) domain 1 87 228 - -
Stsc151750g00005 242 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151750g00005 242 PANTHER RUST RESISTANCE KINASE LR10-RELATED 22 90 IPR045874 GO:0004672
Stsc151750g00005 242 SUPERFAMILY Protein kinase-like (PK-like) 32 238 IPR011009 -
Stsc151750g00005 242 Gene3D Transferase(Phosphotransferase) domain 1 39 86 - -
Stsc151750g00005 242 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Stsc151750g00005 242 Pfam Protein kinase domain 89 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151750g00005 Stsc-Chr151750 15644 16679 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151750g00005 30 233 Receptor kinase-like Gene Family AT1G66930 38.321 1.16e-52 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc151750g00005 PK_Tyr_Ser-Thr 6.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151750g00005 - - ahf:112712060 282.722