Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151750g00002 ATGAGCAGAACCTCTCATGTTAACATTATTGCTCTTCTTGGCTTCTGCTTTCAAGGTTCCAAACGAGCTTTGGTTTATGAATTTATGCCCAATGGCTCGTTTGAGAAGTTAATCTATGAAGAAAATGCTGTGATAGGGGATCGCCAATTGGATTGCCAAACTTTATATGATATTGCAATTGGAGTTGCCAGAGGACTTGAATATCTGCACAAGGGTTGCAATACTAGAATCTTGCATTTTGACATAAAGCCTCATAACATTCTGTTGGATGAAAATTTCTGTCCCAAAATTTCAGATTTCGGACTTGCAAAAGTTTGCACAAGAAAAGAAAGTATTGTATCAATATTTGGTGCTAGAGGAACCGCAGGCTATATTGCCCCCGAGGTATTTTCTAGGAATTTTGGTGCAGTATCTCATAAGTCAGATGTTTATAGTTATGGAATGATGGTGTTAGAAATGGTTGGGCGAAGAAGGAATCTCAAAGTTGAAGTTGATGCATCAAGTGAGATATATTTCCCTCATTGGATATACAATTGGCTTGTGTCAAATCAAGAACTTGGTTTGCGAAGTATAAGAAATGAGTTCGAAGATGAGAAGGTAAGAAAGATGACGATAGTGAGCTTATGGTGCATTCAAACGAACCCTTCAACCCGACCATCAATTAGTAAAGTGGTGGAAATGTTGGAAGGAAGGGCTGAGTTGTTGCAAGTTCCTCCTAAACCATTTTGGTTTTCTCCTCCAACATCTCCCTGA 753 0.3891 MSRTSHVNIIALLGFCFQGSKRALVYEFMPNGSFEKLIYEENAVIGDRQLDCQTLYDIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFCPKISDFGLAKVCTRKESIVSIFGARGTAGYIAPEVFSRNFGAVSHKSDVYSYGMMVLEMVGRRRNLKVEVDASSEIYFPHWIYNWLVSNQELGLRSIRNEFEDEKVRKMTIVSLWCIQTNPSTRPSISKVVEMLEGRAELLQVPPKPFWFSPPTSP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151750g00002 250 SMART serkin_6 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151750g00002 250 FunFam PR5-like receptor kinase 29 240 - -
Stsc151750g00002 250 Gene3D Phosphorylase Kinase; domain 1 1 32 - -
Stsc151750g00002 250 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 245 IPR045874 GO:0004672
Stsc151750g00002 250 PIRSF ILK 1 237 - -
Stsc151750g00002 250 Pfam Protein kinase domain 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151750g00002 250 Gene3D Transferase(Phosphotransferase) domain 1 33 236 - -
Stsc151750g00002 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Stsc151750g00002 250 SUPERFAMILY Protein kinase-like (PK-like) 1 229 IPR011009 -
Stsc151750g00002 250 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151750g00002 Stsc-Chr151750 8873 9625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151750g00002 1 242 Receptor kinase-like Gene Family AT4G18250 60.081 4.36e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc151750g00002 Pkinase 7.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151750g00002 - - ahf:112712060 464.151