Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151737g00005 ATGACTTCTTCTTCTTCATCCTATTATTCAAGAAGCTTCTCAGCAAACTCGCGGGACTACAAGCTTCTAGAAGAAGTCGGATTCGGCGCGAGCGCAACCGTCTACCACGCAGTCCACATCCCCTCAAACGAGCAAGTCGCGGTGAAGGTGCTGGATCTGGACCGATGCAACAGCAACTTCGACGACATAAGGCGAGAAGCTCAGACCATGAGCCTCATCGACCACCCAAACGTCGTCCGCGCCTTCTGCTCCTTCGTCGTCGATCGGAGTCTGTGGGTGGTTATGCCTTTTATGGACCAAGGCTCATGCCTCCACCTCATGAAGGTCGCATACCCCGACGGCTTCGAAGAAGATGCCATTGGATCCGTACTCAAGGAGACACTCAAGGCCCTTGACTACCTCCACCGCCATGGCCACATCCACCGCGATGTTAAGGCTGGGAATATACTTTTGGATTCCAATGGCGATATCAAGCTTGCCGATTTCGGTGTTTCTGCTTGCATGTTTGATGCCGGCGATAGGCAGCGCTCCAGGAACACTTTTGTTGGAACTCCTTGCTGGATGGCACCGGAGGTGCTGCAGCCTGGAACTGGTTATAATTTCAAGGCTGATATTTGGTCGTTTGGGATCACGGCACTTGAGCTGGCTCATGGTCATGCACCTTTCTCGAAATATCCTCCCATGAAGGTGCTTCTAATGACCATACAGAATGCCCCTCCAGGCCTTGATTATGATCGGGATAGGAAGTTTTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCTTGGTAAAAGATCCTACAAAGAGACCAACTGTGGAGAAGTTACTGAAACATTCATTCTTCAAGCAAGCCAAGCCTCCTGAGCTTTCTGTAAAGAAATTGTTTGCTGACTTACCACCACTTTGGAATCGCGTAAAAGCTCTGCAGCTTAAAGATGCTGCTCAACTAGCGCTAAAGAGAATGCCTTCTGCAGAGCAAGAAGCAATATCTCAGAGTGAATATAAGCGAGGAGTTAGTGCATGGAACTTCGATCTTGATGATTTGAAAGCTCAAGCTTCATCGGTAGAGGACAATGACGATTTTGTCGAGATGAAGGAAGAAGATGAAAACAAAATTCTAAGCGAGTACAAGGATACAATTGATTCTCAGCTTAGTGTGGATAACACGAATTTAGAGAACTCACAACATGAGATTGGACTAGAAGTAGGTGGTAGTCACACATCACAAAGTGAGAAGAGAAATGGATTGGTTGCTGAGGCATCACCATCTACCCAAGATAAGGATACAGGAACGAGCAAGACTAAAACTCAATCAACGAGAATTCGTAAAACCCAGAGTGGGCCACTGGTGCCGGGAATGGTTCTTGGTCATTCCTTACCTGATAGAGGGTCTACATTTGAAAGGTTGGAGAGTGAAAATCAGTCATCAGGTGACAAAAGCAGTCGTGATTCACGACGAGCTCCCAACTTTAGTGGTCCATTGATGCTTCCAAACAGAGCTTCAGCAAATAGTTTATCGGCTCCAATAAAATCTTCTGGAGGATACAGAGATTCTTTGGATGACAAATCTAAGGCTAATCTAGTGCAAATCAAAGGACGATTCTCAGTGACTTCAGAGAATTTAGATCTGGTCAAGGATATTCCCGTAAGTTCAGTTTCACGCAGATCTTCGCAGGGATCACCACTGAGGAAATCTGCCAGTGTTGGTGATTGGATGTTGGATTCCAAACAAATGCCAATTGGTCAATCGTCGAAAGATTCTGCGAATATCAATGTTTCTGCCTCACCTCTTATACCTCACCTTCAAAACCTTTTCCATCAGACATCTATTCAGCAGGACCTCATAATGAATCTTTTGAATAGCTTGCAACCTGCTGAGGGAGTTGATGCTTCTCAGAATGGAAAATTGCCACCGCTACCTCGCACTCCAGAGAACAATGGAACTATCGAAACAACAGCCTCAGAGAGGGAACAACTGCTACTGCTAAAAATTTCGGAACTTCAAGCACAGATGATGAATTTGACGGACGAATTGAATTCTGAAAGGTTAAAATACCAGCAGTTGCAACAACAGTTAAATGCTCTTTACAGCCAAGAACAAAATGGAAAAAGAGAAGGGGTTGCATGA 2127 0.4546 MTSSSSSYYSRSFSANSRDYKLLEEVGFGASATVYHAVHIPSNEQVAVKVLDLDRCNSNFDDIRREAQTMSLIDHPNVVRAFCSFVVDRSLWVVMPFMDQGSCLHLMKVAYPDGFEEDAIGSVLKETLKALDYLHRHGHIHRDVKAGNILLDSNGDIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDPTKRPTVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKRMPSAEQEAISQSEYKRGVSAWNFDLDDLKAQASSVEDNDDFVEMKEEDENKILSEYKDTIDSQLSVDNTNLENSQHEIGLEVGGSHTSQSEKRNGLVAEASPSTQDKDTGTSKTKTQSTRIRKTQSGPLVPGMVLGHSLPDRGSTFERLESENQSSGDKSSRDSRRAPNFSGPLMLPNRASANSLSAPIKSSGGYRDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPLRKSASVGDWMLDSKQMPIGQSSKDSANINVSASPLIPHLQNLFHQTSIQQDLIMNLLNSLQPAEGVDASQNGKLPPLPRTPENNGTIETTASEREQLLLLKISELQAQMMNLTDELNSERLKYQQLQQQLNALYSQEQNGKREGVA 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151737g00005 708 SUPERFAMILY Protein kinase-like (PK-like) 18 332 IPR011009 -
Stsc151737g00005 708 MobiDBLite consensus disorder prediction 401 518 - -
Stsc151737g00005 708 MobiDBLite consensus disorder prediction 496 511 - -
Stsc151737g00005 708 CDD STKc_OSR1_SPAK 19 281 - -
Stsc151737g00005 708 SMART serkin_6 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151737g00005 708 Coils Coil 657 705 - -
Stsc151737g00005 708 MobiDBLite consensus disorder prediction 627 648 - -
Stsc151737g00005 708 ProSiteProfiles Protein kinase domain profile. 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151737g00005 708 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 12 681 IPR047173 GO:0043539
Stsc151737g00005 708 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 101 331 - -
Stsc151737g00005 708 MobiDBLite consensus disorder prediction 463 485 - -
Stsc151737g00005 708 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Stsc151737g00005 708 Gene3D Transferase(Phosphotransferase) domain 1 101 330 - -
Stsc151737g00005 708 Pfam Protein kinase domain 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151737g00005 708 MobiDBLite consensus disorder prediction 401 445 - -
Stsc151737g00005 708 FunFam Serine/threonine-protein kinase BLUS1 9 97 - -
Stsc151737g00005 708 Gene3D Phosphorylase Kinase; domain 1 9 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151737g00005 Stsc-Chr151737 14628 21927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151737g00005 13 700 MAP Kinase Kinase Kinase Kinase AT4G10730 66.237 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Stsc151737g00005 Pkinase 8.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151737g00005 - - gmx:100783699 1134.01