LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc151725g00003	ATGCCGCAGGATTCCTCCGATCAAGACCTCGACGACGTCGATTCCGAGTTCGTCGAGGTTGACCCTACTGGTCGCTATGGTCGGTATAAGGAAGTTTTAGGGAAGGGAGCTTTCAAGAAAGTATATCGAGCATTTGATGAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGGTTAAGGTGGCGGATCTGCTGCGTAACTCGGAGGATTTGGAGCGACTTTATTCCGAGGTTCATCTGCTCAAGACATTGAAACACAAGAATATAATTAAGTTCTACAATTCGTGGGTTGACACCAAGAATGAGAACATCAACTTCATTACCGAGATTTTCACCTCGGGGACATTACGCCAATATCGGAAGAAACACAAGCATGTTGATTTGAGAGCTTTGAAGAAATGGTCTAGGCAGATTTTGGAGGGCCTTTTATATCTTCACAGTCATAATCCACCAGTTATACATCGAGACCTTAAGTGTGACAACATTTTTGTCAACGGAAATCAAGGGGAGGTAAAAATTGGAGATTTAGGATTGGCAGCTATTCTTCAACAAGCCCAAGCAGCTCACAGTGTCATAGGTACCCCAGAGTTCATGGCCCCAGAACTTTACGAGGAGGATTACAATGAGCTTGTTGATATCTATGCTTTTGGAATGTGCTTGCTAGAGTTGGTAACCTTTGAGTATCCATATGTTGAATGTTCCAATGCTGCTCAAATATACAAGAAAGTGACATCGGGAATAAAGCCAGCATCATTGGCAAAAGTGGCAGATCCAGAAGTTAAGGCATTCATTGAAAAGTGCATCGCTAATGTTTCAGAACGGTTGCCTGCAAAGGATCTCTTGATGGATCCCTTCCTTCATTCAGACTCTGATAGTGAAAGTGTAGGTCGTTCTTCAAGGTCTGGAACACATCATTCAGGAAATAGTTCTAATAATCAAGCAATTGGAAAAAGTGCTCAGGATGTTCCTGGTGATTCAAATAGGGAATTCACAGTGGAAGGCCAGAGGAAAGATATCGATACAATATTTTTAAAACTGCGAATAGCGGACTCCTCAGGTCATGTTCGGAATATCCACTTCCCTTTCGATATTGGAGCGGACACTGCAATCTCTGTTGCTAGTGAAATGGTTGAGGAGTTAGAACTTACTGATCAAGATGTCACAACTATTGCTGAGACCATTGACTCTGAAATTCGATCTCTCATTCCTGGTTGGAATCCCAGTGAAACTCCTGCTAGTAATGTTCCCGAAGATTCAGCAGTTTCAGATCCCTGTATGTCTGCTGAAACTACTTCTCCTACGGAACATGAATCGNNNNNNNNNNGCACTAGAAATACTACGTTCAGGTCGTAA	1350	0.4237	MPQDSSDQDLDDVDSEFVEVDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQAQAAHSVIGTPEFMAPELYEEDYNELVDIYAFGMCLLELVTFEYPYVECSNAAQIYKKVTSGIKPASLAKVADPEVKAFIEKCIANVSERLPAKDLLMDPFLHSDSDSESVGRSSRSGTHHSGNSSNNQAIGKSAQDVPGDSNREFTVEGQRKDIDTIFLKLRIADSSGHVRNIHFPFDIGADTAISVASEMVEELELTDQDVTTIAETIDSEIRSLIPGWNPSETPASNVPEDSAVSDPCMSAETTSPTEHESXXXXTRNTTFRS	449

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc151725g00003	449	Gene3D	-	339	421	-	-
	Stsc151725g00003	449	MobiDBLite	consensus disorder prediction	290	319	-	-
	Stsc151725g00003	449	FunFam	probable serine/threonine-protein kinase WNK9	110	290	-	-
	Stsc151725g00003	449	ProSiteProfiles	Protein kinase domain profile.	27	285	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc151725g00003	449	Pfam	Oxidative-stress-responsive kinase 1 C-terminal domain	343	397	IPR024678	GO:0004674\|GO:0005524
	Stsc151725g00003	449	MobiDBLite	consensus disorder prediction	290	332	-	-
	Stsc151725g00003	449	CDD	STKc_WNK	25	285	-	-
	Stsc151725g00003	449	FunFam	Probable serine/threonine-protein kinase WNK1	12	108	-	-
	Stsc151725g00003	449	Gene3D	Phosphorylase Kinase; domain 1	11	108	-	-
	Stsc151725g00003	449	MobiDBLite	consensus disorder prediction	423	449	-	-
	Stsc151725g00003	449	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	151	163	IPR008271	GO:0004672\|GO:0006468
	Stsc151725g00003	449	MobiDBLite	consensus disorder prediction	400	449	-	-
	Stsc151725g00003	449	SUPERFAMILY	Protein kinase-like (PK-like)	29	286	IPR011009	-
	Stsc151725g00003	449	SMART	serkin_6	27	285	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc151725g00003	449	Pfam	Protein kinase domain	30	285	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc151725g00003	449	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	12	416	-	-
	Stsc151725g00003	449	Gene3D	Transferase(Phosphotransferase) domain 1	110	293	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc151725g00003	Stsc-Chr151725	13531	17054	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc151725g00003	15	404	MAP Kinase Kinase Kinase	AT3G22420	55.227	1.50e-170	490

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WNK_NRBP	Stsc151725g00003		Pkinase	1.5e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc151725g00003	K08867		-	zju:107418314	665.611