Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151718g00001 ATGGCTAAGACACTTGAAAGGTACCAAAAATGCAGTTATGGAGCCTTGGAAGTACATCACCAACCTGCTGTGGAGACTCAGAGGCGCTATCAAGAGTATCTCAAGCTGAAATCAAAAGTTGAGGCACTGCAGAAGACTCAAAGAAATCTCCTTGGAGAAGAATTGGATAACTTAGATGTTAACGAGCTTGAACGACTTGAGCGTCAGCTGGACTCTTCCTTGAAGCAAATTAGGTCTAACAAGACCCAACTTTTGCTCGACCAACTCTCAGATTTGCAACGAAAGGAAGAGATGCTATTGGAAACAAATAATGTCCTCAGGAACAAGTTGGAGGAAATTAATATGGTGATTCAACCAACATGGGATGCTAGGGAGCAAAATGCTACCTACAACAGCGACCCTCCCCAATCGGAGGGATATTATGAGACAACACACTGCAATAGCACATTGCAAATTGGGCGTCCGGTTTTAGTATTCGGGGGATTTATACAGTTTCAAACAATGTCCATTGTGGATGATGTGAGTCTGCAACAAATGATTTCAATCAATTTAGAAAACATGGCACATGCGTCTATGATCGAGTTGTATGTAGAGTTTGAACAAGTACCTTATGTCGTTGGAGCGGTGGAAGAGGCTCAGCCGGACTTGGCATTTGACGGTTATTATAGCGACAGTGAAAAAGAATTCGAAGGCAACTATGAAATGGACGATGCAAATGAAGAAGACGTACTAGAACATGATATGGATTCAGATGTGGGGGATGTTGCAAATGCTCTTGCTAATGAATTCCCCTTTCAAGAAGCATCCTTCATGCGTGTTTTGGACGAATAG 831 0.4248 MAKTLERYQKCSYGALEVHHQPAVETQRRYQEYLKLKSKVEALQKTQRNLLGEELDNLDVNELERLERQLDSSLKQIRSNKTQLLLDQLSDLQRKEEMLLETNNVLRNKLEEINMVIQPTWDAREQNATYNSDPPQSEGYYETTHCNSTLQIGRPVLVFGGFIQFQTMSIVDDVSLQQMISINLENMAHASMIELYVEFEQVPYVVGAVEEAQPDLAFDGYYSDSEKEFEGNYEMDDANEEDVLEHDMDSDVGDVANALANEFPFQEASFMRVLDE 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151718g00001 276 Coils Coil 89 112 - -
Stsc151718g00001 276 Pfam K-box region 25 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc151718g00001 276 Coils Coil 60 83 - -
Stsc151718g00001 276 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151718g00001 Stsc-Chr151718 3601 18241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151718g00001 1 160 MADS-box Gene Family AT5G15800 55.422 1.28e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151718g00001 K09264 - gmx:100811049 240.35