Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151713g00005 ATGACGGCGGGTCCTGAAGCCGAAAATGCAAATGAACAAACACACGAGGTTTTTGATTTTCACTTCAAAAACTACTTCGATTACGTCATGAAATCCGGTTCGATTTGTTACACGAAATCCGGTTCGATTGTCTTATGGAGCTATGATTCTTGCAGTTTACGTGTGATGACATTTAAAACACTTGCTGAGGTTGGTTTGTTCTACAAAGAGTATGCAAAACGTGCAGGGTTCTCTACCAAAATAAGAAACACAAATAGATGTAAGGAGACAAAGGAAGAAATCAATCAACTCATAACATGTAACAGACAAGGACAATGGACATCTGAGGTACCTTACGTTGAGAAGACGAAGCCTATCTGTGGTGCAAACTGTCCCGCACGAATTTATGCTCACGTAATAAAGACAACTCGAATGTGGCGCATTTCAAAAGTAGTTCTTCGTCATTCACATCCATGCTTCCCAGAGCAAGCTCAGATGTTAGCACAACACATGGAGCTTAGCTTGGAAGTTCATCGTATCATAGAAAACAACGATGTATCCGGTATTAGACCATGTCAAACGTATCAAGCGCTTGTGACAGCTGCTGGTGGTCACAATGAGTTAGGATTCATTGAAAGGGATGTGAAAAACTAA 633 0.4092 MTAGPEAENANEQTHEVFDFHFKNYFDYVMKSGSICYTKSGSIVLWSYDSCSLRVMTFKTLAEVGLFYKEYAKRAGFSTKIRNTNRCKETKEEINQLITCNRQGQWTSEVPYVEKTKPICGANCPARIYAHVIKTTRMWRISKVVLRHSHPCFPEQAQMLAQHMELSLEVHRIIENNDVSGIRPCQTYQALVTAAGGHNELGFIERDVKN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151713g00005 210 Pfam FAR1 DNA-binding domain 67 154 IPR004330 -
Stsc151713g00005 210 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 56 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151713g00005 Stsc-Chr151713 26207 26922 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151713g00005 FAR1 5.5e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151713g00005 - - aip:110271906 190.274