Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151695g00004 ATGGCTGCAAAACTTGAAGGTGGAGCCTATCTCTCTTCATTTATTGATGTTATTTCAGAGAAGTTGTCTTCAATACTTGAAGATGATTCTGTCCTTGACTCTGTCCAGGAGTTGCTTCAAAGGTTGGATGATTGTCTGTGTCATGTTGGACCTGTGCTTGATGATGCTGAGCTGAAGCAGTTCAATGACAAGAGAGTGAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATATGGATGATGACTTGCTCGATGAACTCTCCACAAAAGCTGCCACTGCCACTCCAAGGGATCCAGGTAACTTTTCTCCCTGGTCTCGCTTTGTTGATTCATGTATTGAAGATAGTGGTGCCATGGAGAAGATAGTCGGGACATTAGAGTCTGTTGTAGGACGAAAAGGTAAACTTGGTCTTGAAAAGAGTGCCAAGTTGGACACGTCATGGAGAATTCCATCCACATCTCTCGTTGTAAGTTCTGACATATTTGGTCGGGATGATGACAAGGGGAACATAATCAAATTGCTGTTAGATGATACCTGTAATGCTGAATTACCTGTGACTGTGATCCCCATCGTAGGTATGGGTGGAATAGGAAAAACTACTTTGGCTCAATGGGTTTACAATGATGCCAAAGTTGTGGAAAAATTTGGCATTAGAGCATGGGTGTGTGTTGCTGAAAATGCTGACCCTGTTAAAATGACAAAGACAATAATAGAGGCAATAGATTTTTCTCCCTGTAACATGAATAATTTTGATTCACTTCAGATTGATTTGAAGAAAAAACTGACAGGAAAGACATTCTTAATTGTTTTAGATGATGTCTGGCATGATGGACGAGACATGTGGGAGAATTTTCTAAAACCTTTTCAATATGGAAATAATGGAAGTAAGATTCTCCTAACAACCCGTAGTGAAAAGGTTGCTTCTGTGATCGCAACTAACAATCTACATTATCGACTAAGTTTATTGTCCAATGAAGATTGCTGGTTGATGTTTTTGAAGCATTCATCTATTTCTCCTAATTCTAAACAATATACAACTCTGGAACCAATTGGTCGAAAAATTGTTGAAAAGTGTAAGGGGTTGCCTTTGGCTGTGAAGACGCTTGGAGGCTTATTGCGTAAAAAGTATAATGAAGGGGATTGGGAAAATATACTTGAATGTAAAATCTGGGAACTCTCTGAAGATGACTGTAAGATTGTTCCTGCATTAAGAGTTAGTTATCATTACCTCCCTTCTCATTTAAAGCGATGTTTTGTTTATTGCTCCTTATATCCTGAGGATTATGAATTTGACAAAGAAGAGTTAATTTTGTTATGGATGGCAGAAGATCTTTTACAACCAAAGGAAAATAACACATTAGAAAATACTGGTTGTGCATATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAACCTTCCAGTGCTAATGGAGAGTTATTTGTAATGCATGACCTCATGCATGATCTAGCAACATTTTTTGCTGGAAAATTCTATTTCAGACTCAGAGTTTGA 1515 0.3815 MAAKLEGGAYLSSFIDVISEKLSSILEDDSVLDSVQELLQRLDDCLCHVGPVLDDAELKQFNDKRVKKWLVDLQDALYMDDDLLDELSTKAATATPRDPGNFSPWSRFVDSCIEDSGAMEKIVGTLESVVGRKGKLGLEKSAKLDTSWRIPSTSLVVSSDIFGRDDDKGNIIKLLLDDTCNAELPVTVIPIVGMGGIGKTTLAQWVYNDAKVVEKFGIRAWVCVAENADPVKMTKTIIEAIDFSPCNMNNFDSLQIDLKKKLTGKTFLIVLDDVWHDGRDMWENFLKPFQYGNNGSKILLTTRSEKVASVIATNNLHYRLSLLSNEDCWLMFLKHSSISPNSKQYTTLEPIGRKIVEKCKGLPLAVKTLGGLLRKKYNEGDWENILECKIWELSEDDCKIVPALRVSYHYLPSHLKRCFVYCSLYPEDYEFDKEELILLWMAEDLLQPKENNTLENTGCAYFDELVARSFFQPSSANGELFVMHDLMHDLATFFAGKFYFRLRV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151695g00004 504 Gene3D - 322 406 IPR042197 -
Stsc151695g00004 504 FunFam Probable disease resistance protein At1g63360 408 493 - -
Stsc151695g00004 504 Gene3D - 146 316 IPR027417 -
Stsc151695g00004 504 Gene3D - 407 492 IPR036388 -
Stsc151695g00004 504 FunFam Probable disease resistance protein At1g61300 147 315 - -
Stsc151695g00004 504 Pfam Rx N-terminal domain 16 94 IPR041118 -
Stsc151695g00004 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 422 IPR027417 -
Stsc151695g00004 504 Pfam NB-ARC domain 166 387 IPR002182 GO:0043531
Stsc151695g00004 504 PRINTS Disease resistance protein signature 261 275 - -
Stsc151695g00004 504 PRINTS Disease resistance protein signature 188 203 - -
Stsc151695g00004 504 PRINTS Disease resistance protein signature 359 373 - -
Stsc151695g00004 504 Gene3D - 15 123 - -
Stsc151695g00004 504 PANTHER DISEASE RESISTANCE PROTEIN RP 53 492 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151695g00004 Stsc-Chr151695 11881 13395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151695g00004 184 491 WRKY Transcription Factor Family AT5G45050 24.375 1.47e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151695g00004 - - ahf:112709990 790.03