Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151694g00002 ATGAAGAGCCCATGGCTCAGGCTTTCTCTTTTAACCACCATAACCATAATAACCATATGCTTCTCTTTTCACCCTCACAATTCCCATGCAGCTTTAACATCAATAACTTCAAACCAATCTCTCTCCGGTGATCAAACTCTTGTCTCCAAAGATGAAAGCTTTGAACTGGGTTTCTTCAATCCAGATAACACCTCTAAATACTACATAGGCATGTGGTACAAAAAAAGAGTCACTCAAAGAACCTATGTTTGGGTAGCAAATAGAGATAACCCAGTTTCTGATAAAAACTCTGCCAAATTAACACTATCTAATGGCAATTTAGTGCTCTTAGACCAATCCCAAAAACAAGTTTGGTCAACAAACTTAAGTCCTTCAAACTCGGATTCTGTAGCAGCCGTGCTTTTAGATTCTGGGAATCTTATATTGAGTGATAAGCCTAACCCTTCAGAATCAGATTCTCTATGGCAAAGCTTTGATCATCCCACAGATACATGGCTTCCTGGCGGCAAAATCAAGCTTGATAAGAAAACTGGTAAGCCTCAGTACCTAACTTCTTGGAAGAACACTCAAGATCCTGGAACAGGATTGTTCTCTTTGGAATTAGACCCCGAAGGAACCAAAGCTTATTTGATTCTTTGGAACAAAACCAACGAATATTGGAGTAGTGGAGCTTGGAATGGTCAAATTTTCAGCTTGGTACCTGAAATGAGGTTGAATTACATCTACAATTTCTCCTTCCATGATGATCCTGATGAGTCTTACTTCACTTATACGGTATATAACACCACAATTCTTTCGCGGTTCGTGATGGATGTCTCCGGGCAGATCAAGGAGCTTACATGGCTGGACAGTTCACAGAATTGGAACTTGTTTTGGTCTCAACCAAGGCAGCAGTGTGAGGTTTATGCCTTCTGTGGCGCGTTTGGGACTTGTACTGAGAACTCTATCCCTTCCTGCAACTGTTTGACTGGCTATGAACCAAGTAATTCATCTGATTGGAACCTTGAGGATTACTCAAGTGGATGCAAGAGAACAGCGAAGTTCCAATGCGAGACCACGAATCCTAAAGGCGGTGGTTCGAAGGACAAGTTTATGGAGCTTCCCAACATGGCATTGCCTAATAACTCTCAAGCTTTGAATGCAGGGGATGCAGAGGAATGTGCTTCTTCTTGCTTGAACCAATGTTCTTGCACGGCTTATGCTTTTAACAGTAAAGGTTGTTCAATCTGGAAGGGTGATCTCCTGACTCTTCAGCAGCTTTCTCAAGGTGACAGCAATGCAGAAACCTTAAATTTAAGGCTTGCAGCATCTGAATTTCCTGACAGTAAGAGCAACAAGGGGACGATAATTGGCGCTGTAGCCGGCGGCGTTGGCGTCATAGTTGTTGTCCTGGTTGCTCTTGTCTTCTTCTTGGTGAGGAGAAGGAGACGAGTTCAAACCAGGACAACAATGGAGGGTTCTTTGGTGGCTTTTGCATACAGAGATTTGCAAAACGCCACCAAGAACTTCTCCGAGAAACTTGGAGGAGGTGGCTTTGGTTCTGTTTTCAAAGGAACATTGCCTGATTCGAGTGTTATAGCTGTGAAGAAGCTTGAGAGCATTAGCCAAGGCGAGAAGCAGTTCCGTACGGAAGTTAGCACAATTGGAACAGTCCAGCATGTCAATCTTGTTAGGCTCCGCGGCTTCTGCTCCGAAGGCACCCAAAAGCTTCTTGTATATGATTTCATGCCGAATGGTTCTTTAGATTCAAGCTTGTTTCATGAGGGGGGTTCCAAGGTGTTGGATTGGAAGATAAGGTACCAAATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATGTGAAGCCGGAAAATATTCTCTTAGATTCCGAGTTTTGTCCAAAAGTGGCGGATTTCGGCCTGGCTAAGCTTGTTGGAAGGGAATTCAGCAGGGTCCTTACAACAATGAGAGGAACAAGGGGATACCTGGCACCGGAGTGGATTTCCGGGGTGGCTATAACGGCCAAAGCAGATGTATACAGCTATGGAATGATGTTGTTTGAGTTGGTTTCAGGTAGGAGGAACTCTGAGTCATCGGAAGACGGACGAGTAGTCCGATTCTTCCCTACAACGGCGGCCTACACGGTGAACCAAGGTGGCAATGTTTTTGAGCTATTGGACCCAAAGTTGGAGGGAAATGCTGACATTGATGAGGTGGTTAGAGTCATCAAAGTTGCTTCTTGGTGTGTACAAGATGATGAGGCTCATAGGCCTTCCATGGGTCAAGTTGTTCAGATTCTTGAAGGGCTTTTGGAGGTTTCTTTTCCTCCAGTTCCGAGATCACTACAAGCATTTGTTGAGAACCAAGAACACATAGTTTTCTTCACTGATTCAAGCTCTACACAGAGTTCAGAAGCCAAAAGCAATCTCTCCACAACTTCTCAAGCCAAAAGCAAAGTTTCTTCTTCTACAAGCCAGCAACAGCAAGATTAG 2538 0.424 MKSPWLRLSLLTTITIITICFSFHPHNSHAALTSITSNQSLSGDQTLVSKDESFELGFFNPDNTSKYYIGMWYKKRVTQRTYVWVANRDNPVSDKNSAKLTLSNGNLVLLDQSQKQVWSTNLSPSNSDSVAAVLLDSGNLILSDKPNPSESDSLWQSFDHPTDTWLPGGKIKLDKKTGKPQYLTSWKNTQDPGTGLFSLELDPEGTKAYLILWNKTNEYWSSGAWNGQIFSLVPEMRLNYIYNFSFHDDPDESYFTYTVYNTTILSRFVMDVSGQIKELTWLDSSQNWNLFWSQPRQQCEVYAFCGAFGTCTENSIPSCNCLTGYEPSNSSDWNLEDYSSGCKRTAKFQCETTNPKGGGSKDKFMELPNMALPNNSQALNAGDAEECASSCLNQCSCTAYAFNSKGCSIWKGDLLTLQQLSQGDSNAETLNLRLAASEFPDSKSNKGTIIGAVAGGVGVIVVVLVALVFFLVRRRRRVQTRTTMEGSLVAFAYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTQKLLVYDFMPNGSLDSSLFHEGGSKVLDWKIRYQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKPENILLDSEFCPKVADFGLAKLVGREFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNSESSEDGRVVRFFPTTAAYTVNQGGNVFELLDPKLEGNADIDEVVRVIKVASWCVQDDEAHRPSMGQVVQILEGLLEVSFPPVPRSLQAFVENQEHIVFFTDSSSTQSSEAKSNLSTTSQAKSKVSSSTSQQQQD 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151694g00002 845 Gene3D Phosphorylase Kinase; domain 1 468 575 - -
Stsc151694g00002 845 Gene3D Transferase(Phosphotransferase) domain 1 630 790 - -
Stsc151694g00002 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 158 - -
Stsc151694g00002 845 ProSitePatterns Protein kinases ATP-binding region signature. 507 530 IPR017441 GO:0005524
Stsc151694g00002 845 SMART blect_4 38 161 IPR001480 -
Stsc151694g00002 845 Pfam PAN-like domain 360 415 IPR003609 -
Stsc151694g00002 845 ProSiteProfiles Bulb-type lectin domain profile. 32 155 IPR001480 -
Stsc151694g00002 845 SMART ntp_6 359 434 IPR003609 -
Stsc151694g00002 845 Gene3D - 27 159 IPR036426 -
Stsc151694g00002 845 CDD PAN_AP_plant 356 435 - -
Stsc151694g00002 845 CDD B_lectin 38 161 IPR001480 -
Stsc151694g00002 845 PANTHER OS07G0415500 PROTEIN 12 602 - -
Stsc151694g00002 845 FunFam Serine/threonine-protein kinase 468 575 - -
Stsc151694g00002 845 Pfam Protein tyrosine and serine/threonine kinase 503 588 IPR001245 GO:0004672|GO:0006468
Stsc151694g00002 845 SUPERFAMILY Hairpin loop containing domain-like 361 422 - -
Stsc151694g00002 845 Pfam Protein kinase domain 635 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151694g00002 845 ProSiteProfiles PAN/Apple domain profile. 350 434 IPR003609 -
Stsc151694g00002 845 PIRSF SRK 4 606 IPR024171 GO:0004674
Stsc151694g00002 845 PIRSF SRK 634 841 IPR024171 GO:0004674
Stsc151694g00002 845 MobiDBLite consensus disorder prediction 817 845 - -
Stsc151694g00002 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 192 IPR036426 -
Stsc151694g00002 845 SUPERFAMILY Protein kinase-like (PK-like) 503 785 IPR011009 -
Stsc151694g00002 845 SMART serkin_6 501 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151694g00002 845 Coils Coil 602 602 - -
Stsc151694g00002 845 ProSiteProfiles Protein kinase domain profile. 501 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151694g00002 845 Pfam S-locus glycoprotein domain 220 328 IPR000858 GO:0048544
Stsc151694g00002 845 Pfam D-mannose binding lectin 81 187 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151694g00002 Stsc-Chr151694 4663 7818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151694g00002 443 789 Receptor kinase-like Gene Family AT1G56120 40.282 3.56e-62 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Stsc151694g00002 Pkinase 4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151694g00002 - - ahf:112789715 1316.21