Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151694g00001 ATGGATGTCTCCGGGCAGATCAAGGAGCTTACATGGCTGGACAGTTCACAGAATTGGAACTTGTTTTGGTCTCAACCAAGGCAGCAGTGTGAGGTTTATGCCTTCTGTGGCGCGTTTGGGACTTGTACTGAGAACTCTATCCCTTCCTGCAACTGTTTGACTGGCTATGAACCAAGTAATTCATCTGATTGGAACCTTGAGGATTACTCAAGTGGATGCAAGAGAACAGCGAAGTTCCAATGCGAGGCTGATGATCTTTCTAGTGGTGCTATGGACAAGTTTGCGGCATTTCCAAACATGGCATTGCCTTCGCTTCCACAAACTTTAAGCGTTGTGGATGCAGAGGAATGCGCTTCGACTTGCTTAAAGAACTGTTCTTGCACAGCATATGCATATGACAGTAAAGGTTGTTTAATTTGGAATGGTGACCTCTTGAATGTGCAGCAGCTTTCTCAAGATGATAGTAATGCAGAGACCTTGTTTCTCAAGCTTGCAGCATCTGAATTTCCGGATTCTAAGAGCAACAAGAGGAGAACCATTGGTGCTGTTACGGGTGCTGTTGGTGGCATGGTGATTGTCCTAGCAATTGTTCTATTTGCCTTGGTGAGGAGAAGGAAACAAGTTCAATCAGGAACATTGGTTGAAGGCTCATTGAAGACATTTGGGTACAGAGATTTGCAAATTGCAACAATGAACTTCTCAGATAGAATGGGAAGAGGAAGTTTTGGTTCAGTCTTCAAGGGGACATTTCCAGATTCAAGTGTCATAGCAGTGAAGAAGCTCGAAAACATTAGGCAAAGCGAGAAACAGTTCCGGACAGAAGTGAGAACAATTGGGACTGTCCAGCATGTCAATCTAGTTAACCTCCGCGGATTCTGTTCCGAAGGTACTAGAAAATTTCTTATCTATGATTACATGCCAAATGGATCCTTGGATTCAATCTTGTTCCATGAGAAGGGCTCCAAGTCCAAGGTGTTGGAATGGAAAGAAAGGTACCAAATTGCTCTTGGGACAGCTAGAGGATTGTCTTATCTCCATGAGAAGTGTAGAGACTGCATCATACACTGCGATGTGAAGCCGGAAAACATTCTTTTAGATGCTGATTTTTGTCCAAAAGTGGCACATTTTGGCCTTGCAAAGCTAGTTGGAAGGGACATTGGCCAGGTCCTCACTACCATGAGAGGAACAAGGGGATATCTCGCTCCGGAATGGGATTCAGGGGTGCCTATAACTGCCAAAGCTGACGTCTATAGCTACGGAATGATGCTGTTTGAGTTTGTTTCTGGTAGAAGGAACTCAGATCCACCAGAAGATGTACAAGCTAGGTTCTTCCCTACATGGGCTGCAAACACTGCAAGCGAAGGCGGAAATGTGCTTAGCCTTTTGGATCCAAAGTTGAAGGGAAATGCTAACATCGAAGAGGTCATTCAAGTCATCAAAATCGCTTCTTGGTGTGTCCAAGATGATCAGACTAATAGGCCAACCATGAGTGAGGTTGTTTACATTCTTGATGGTGTGTTGGATGTAGATTTTCCTCCAGTGCCAATATTCCGACAAGCCTTTCTTGAGAACCAAGAAACTTCAGTTTTCTTCATTGATTCGGTCTCTACATAG 1614 0.4418 MDVSGQIKELTWLDSSQNWNLFWSQPRQQCEVYAFCGAFGTCTENSIPSCNCLTGYEPSNSSDWNLEDYSSGCKRTAKFQCEADDLSSGAMDKFAAFPNMALPSLPQTLSVVDAEECASTCLKNCSCTAYAYDSKGCLIWNGDLLNVQQLSQDDSNAETLFLKLAASEFPDSKSNKRRTIGAVTGAVGGMVIVLAIVLFALVRRRKQVQSGTLVEGSLKTFGYRDLQIATMNFSDRMGRGSFGSVFKGTFPDSSVIAVKKLENIRQSEKQFRTEVRTIGTVQHVNLVNLRGFCSEGTRKFLIYDYMPNGSLDSILFHEKGSKSKVLEWKERYQIALGTARGLSYLHEKCRDCIIHCDVKPENILLDADFCPKVAHFGLAKLVGRDIGQVLTTMRGTRGYLAPEWDSGVPITAKADVYSYGMMLFEFVSGRRNSDPPEDVQARFFPTWAANTASEGGNVLSLLDPKLKGNANIEEVIQVIKIASWCVQDDQTNRPTMSEVVYILDGVLDVDFPPVPIFRQAFLENQETSVFFIDSVST 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151694g00001 537 Gene3D Phosphorylase Kinase; domain 1 197 305 - -
Stsc151694g00001 537 SMART serkin_6 231 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151694g00001 537 Gene3D Transferase(Phosphotransferase) domain 1 306 510 - -
Stsc151694g00001 537 Pfam Protein kinase domain 234 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151694g00001 537 CDD PAN_AP_plant 80 165 - -
Stsc151694g00001 537 FunFam Receptor-like protein kinase 4 199 305 - -
Stsc151694g00001 537 SUPERFAMILY Hairpin loop containing domain-like 90 154 - -
Stsc151694g00001 537 SMART ntp_6 89 164 IPR003609 -
Stsc151694g00001 537 Pfam PAN-like domain 90 147 IPR003609 -
Stsc151694g00001 537 SUPERFAMILY Protein kinase-like (PK-like) 218 528 IPR011009 -
Stsc151694g00001 537 Pfam S-locus glycoprotein domain 1 59 IPR000858 GO:0048544
Stsc151694g00001 537 ProSiteProfiles PAN/Apple domain profile. 81 165 IPR003609 -
Stsc151694g00001 537 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 306 513 - -
Stsc151694g00001 537 ProSiteProfiles Protein kinase domain profile. 231 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151694g00001 537 CDD STKc_IRAK 237 505 - -
Stsc151694g00001 537 PANTHER OS07G0415500 PROTEIN 2 518 - -
Stsc151694g00001 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151694g00001 Stsc-Chr151694 15 1660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151694g00001 192 513 Receptor kinase-like Gene Family AT5G20050 38.202 1.74e-72 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc151694g00001 Pkinase 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151694g00001 - - pvu:PHAVU_011G109100g 790.03