Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151693g00006 ATGTTCCAGATCGTTGCAAGCAGAGTGAGGGCTTCAACTCCACATGCCCGCAACGCTCTCCTTTCTTTCAATCTCTCTCGCTGCGGACTCATTTTTGCCTTATCAAGCAGGTCTGTTCATGCATTATCATCTGCCACAGTAGAAGCCGAAGAGATATCAGGTTCTAGACCAGCTGAAGTTTTGAACTTGGTTCAGGGTAAATGGGTTGGAGCTTCAAAGTGGAACACAATTGTAGATCCGCTAAATGGAGACCCCTTTATTAAAGTTGGTGAAGTTGATGAAACAGGCCTTCAGCCTTTTGTGGAAAGCTTGGCTAGCTGCCCCAAACATGGTCTACACAATCCTTTTAAGGCTCCAGAGAGTACTTTTGTTTCGGATTTCTTTGCAAGGCTAATACAGAGAGTTTCTCCCAAGAGCTACCATCAGGCCTGTGCAGAAGTTTATGTGACACAAAAGTTTCTAGAGAATTTCTGCGGTGATCAGGTTCGTTTCTTGGCAAGATCTTTTGGCGTGCCTGGAAATCATCTTGGGCAGCAAAGTCATGGTTTCCGTTGGCCATATGGTCCGGTGGCTATTATTACTCCTTTCAATTTTCCATTAGAGATTCCGGTCCTTCAACTGATGGGTGCAGTTTATATGGGCAACAAGCCAGTCCTTAAAGTTGATAGCAAGGTAAGCATTGTCATGGAGCAAATGCTGCGTCTACTTCATACATGTGGTTTGCCTGTAGAAGACGTAGACTTCATAAATTGTGATGGGAAGACAATGAACAAACTGTTGCAGGAGGCAAATCCAAGAATGACCCTTTTCACTGGGAGTTCAAGAGTGGCAGAGAAATTGGCTGGCGATCTGAAGGGCCGGATTAAATTGGAAGATGCTGGATTTGATTGGAAAATACTGGGCCCTGATGTTGACCAGGAAGATTACGTTGCATGGGTCTGTGACCAGGATGCTTATGCATGCAGTGGTCAGAAGTGCTCAGCACAATCGTTATTATTTATGCATGAGGGTCTTGCTGAGAGAAGAAAGCTAGAGGACTTGACAATTGGTCCAGTTCTCACTTTTACAACCGAATCAATGATGGATCACATGAAACAATTACTTGAGATACCAGGTTCAAAGCTGCTCTTTGGGGGCAAGCCTTTGGAGGGTCATTCTATTCCCCCTATTTACGGTGCTATTAGGCCCACTGCTATTTATGTTCCCCTTGAGGAAATTGTGAAGGACAAGAATTATGAGCTTGTGACAAAAGAAATTTTTGGACCATTCCAGATAATTACTGACTACAAAAGCAGTCAACTACCAACCGTGTTGGATACCTTGGAAAAAATGCACGCACATTTAACTGCTGCTGTAGTTTCAAATGATCCTCTCTTTTTACAGGAAGTCATTGGTAGATCAGTGAATGGTACAACTTATGCTGGTCTAAGAGCAAGGACTACTGGAGCTCCACAAAACCATTGGTTTGGACCTTCTGGAGATCCTAGGGGTGCTGGAATCGGAACACCAGAAGCGATAAAACTAGTATGGTCTTGCCACAGGGAAGTTATATATGATTTTGGTCCAGTACCAAACCGTTGGGAAATTCCTCCATCTACATGA 1602 0.4395 MFQIVASRVRASTPHARNALLSFNLSRCGLIFALSSRSVHALSSATVEAEEISGSRPAEVLNLVQGKWVGASKWNTIVDPLNGDPFIKVGEVDETGLQPFVESLASCPKHGLHNPFKAPESTFVSDFFARLIQRVSPKSYHQACAEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGAVYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINCDGKTMNKLLQEANPRMTLFTGSSRVAEKLAGDLKGRIKLEDAGFDWKILGPDVDQEDYVAWVCDQDAYACSGQKCSAQSLLFMHEGLAERRKLEDLTIGPVLTFTTESMMDHMKQLLEIPGSKLLFGGKPLEGHSIPPIYGAIRPTAIYVPLEEIVKDKNYELVTKEIFGPFQIITDYKSSQLPTVLDTLEKMHAHLTAAVVSNDPLFLQEVIGRSVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTPEAIKLVWSCHREVIYDFGPVPNRWEIPPST 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151693g00006 533 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 319 330 IPR016160 GO:0016491
Stsc151693g00006 533 Pfam Aldehyde dehydrogenase family 128 475 IPR015590 GO:0016491
Stsc151693g00006 533 SUPERFAMILY ALDH-like 62 499 IPR016161 GO:0016491
Stsc151693g00006 533 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 38 533 IPR044638 GO:0004029
Stsc151693g00006 533 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 121 296 IPR016162 GO:0016491
Stsc151693g00006 533 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 297 474 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151693g00006 Stsc-Chr151693 20892 27341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151693g00006 1 533 Aldehyde Dehydrogenase Gene Family AT5G62530 73.145 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151693g00006 K00294 - gmx:100806579 903.279